Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-220 |
| Cow position: | chr23:2342586-2342354 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 1-222 |
| Cow position: | chr23:4639085-4639320 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 130 |
| Conread position: | 1-239 |
| Cow position: | chr23:23172285-23172028 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 24, 191 |
| Conread position: | 1-242 |
| Cow position: | chr23:8287447-8287206 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 1-254 |
| Cow position: | chr23:37717005-37716740 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 1-278 |
| Cow position: | chr23:7314417-7314115 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr23:617976-618263 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 1-279 |
| Cow position: | chr23:38691998-38691697 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr23:41141720-41142021 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 261 |
| Conread position: | 1-281 |
| Cow position: | chr23:11714359-11714664 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr23:964988-965294 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 1-284 |
| Cow position: | chr23:3707628-3707329 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 1-284 |
| Cow position: | chr23:5873065-5873373 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr23:13512604-13512311 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 1-284 |
| Cow position: | chr23:14972449-14972771 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 270 |
| Conread position: | 1-284 |
| Cow position: | chr23:16055280-16054982 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 1-284 |
| Cow position: | chr23:16497737-16498036 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 1-284 |
| Cow position: | chr23:16613679-16613972 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 1-284 |
| Cow position: | chr23:19949079-19949387 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr23:21821802-21822077 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 1-284 |
| Cow position: | chr23:22145799-22146107 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr23:23282715-23282431 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 1-284 |
| Cow position: | chr23:31648525-31648818 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-294 |
| Cow position: | chr23:2576896-2576609 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 1-303 |
| Cow position: | chr23:28218932-28218607 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 307 |
| Conread position: | 2-284 |
| Cow position: | chr23:21243230-21243535 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 270 |
| Conread position: | 6-282 |
| Cow position: | chr23:25682490-25682749 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 7-144 |
| Cow position: | chr23:28304416-28304272 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 7-235 |
| Cow position: | chr23:15218387-15218618 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-252 |
| Cow position: | chr23:4513984-4513716 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 7-284 |
| Cow position: | chr23:2025579-2025879 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 182 |
| Conread position: | 7-284 |
| Cow position: | chr23:2718814-2718514 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 259 |
| Conread position: | 7-284 |
| Cow position: | chr23:2793757-2794054 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 206 |
| Conread position: | 7-284 |
| Cow position: | chr23:3879585-3879881 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 220 |
| Conread position: | 7-284 |
| Cow position: | chr23:4818523-4818226 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr23:4890187-4889890 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr23:11780280-11779984 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr23:15178564-15178277 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 7-284 |
| Cow position: | chr23:15527078-15526769 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr23:19491052-19490747 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-284 |
| Cow position: | chr23:20154726-20155009 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 7-284 |
| Cow position: | chr23:36029879-36030174 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 7-294 |
| Cow position: | chr23:1022459-1022765 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 296 |
| Conread position: | 7-294 |
| Cow position: | chr23:2759399-2759086 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 7-323 |
| Cow position: | chr23:22168141-22167808 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 9-285 |
| Cow position: | chr23:7044691-7044971 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 13-231 |
| Cow position: | chr23:38579195-38578982 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 190, 45 |
| Conread position: | 19-284 |
| Cow position: | chr23:27401016-27400726 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 20-279 |
| Cow position: | chr23:948348-948624 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 22-254 |
| Cow position: | chr23:14777481-14777721 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 48-284 |
| Cow position: | chr23:29450896-29451148 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 6 |
| Conread position: | 51-270 |
| Cow position: | chr23:25534740-25534520 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 65-270 |
| Cow position: | chr23:2439830-2440038 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 73-279 |
| Cow position: | chr23:38582122-38581923 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 74-295 |
| Cow position: | chr23:14963621-14963859 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 229 |
| Conread position: | 95-278 |
| Cow position: | chr23:14922891-14923089 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.