Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-185
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 73

Conread position: 1-189
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 1-233
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 189

Conread position: 1-247
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-252
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 44

Conread position: 1-263
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 54

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 1-278
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-278
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 270

Conread position: 1-279
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 272

Conread position: 1-283
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 206

Conread position: 1-284
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 137

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 73

Conread position: 1-284
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 1-303
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 303

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 307

Conread position: 1-309
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 307

Conread position: 1-311
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 68

Conread position: 1-313
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-317
Cow position:
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 2-284
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 39

Conread position: 2-295
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 302

Conread position: 3-194
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 3-279
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 150

Conread position: 3-303
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 53

Conread position: 6-282
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 203

Conread position: 7-189
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 7-209
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 49

Conread position: 7-221
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 175

Conread position: 7-241
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 244

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 147

Conread position: 7-284
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 18, 38

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 7-295
Cow position:
Alignm length: 324
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 315

Conread position: 16-285
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 68

Conread position: 19-284
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 26

Conread position: 19-284
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 49

Conread position: 20-284
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 28

Conread position: 20-285
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 46

Conread position: 22-271
Cow position:
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 22-284
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 27-278
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 46

Conread position: 28-279
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 31-270
Cow position:
Alignm length: 246
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 33

Conread position: 37-284
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 15

Conread position: 40-274
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 12

Conread position: 51-278
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 15

Conread position: 59-275
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 61-284
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 85

Conread position: 77-278
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 150

Conread position: 100-284
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 72

Conread position: 113-284
Cow position:
Alignm length: 175
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 155

Show alignments to all cow chromosomes.