Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-155 |
| Cow position: | chr25:20346424-20346589 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-159 |
| Cow position: | chr25:16924843-16925011 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 1-174 |
| Cow position: | chr25:33614406-33614217 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-188 |
| Cow position: | chr25:18450893-18450706 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 1-254 |
| Cow position: | chr25:11830552-11830822 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-254 |
| Cow position: | chr25:19339040-19339311 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 24, 190 |
| Conread position: | 1-265 |
| Cow position: | chr25:18183252-18182980 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 1-275 |
| Cow position: | chr25:18273225-18273511 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 87 |
| Conread position: | 1-279 |
| Cow position: | chr25:13062151-13062453 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr25:18251373-18251659 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 1-280 |
| Cow position: | chr25:21902596-21902293 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-281 |
| Cow position: | chr25:13693109-13693414 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-281 |
| Cow position: | chr25:20773812-20774117 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-282 |
| Cow position: | chr25:18486009-18486298 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 173 |
| Conread position: | 1-284 |
| Cow position: | chr25:11041908-11041618 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 1-284 |
| Cow position: | chr25:11931236-11931528 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 190 |
| Conread position: | 1-284 |
| Cow position: | chr25:17559006-17559309 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-284 |
| Cow position: | chr25:18305698-18305390 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 1-284 |
| Cow position: | chr25:26928835-26928552 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 1-299 |
| Cow position: | chr25:27021037-27021349 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 1-303 |
| Cow position: | chr25:17588008-17588322 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 1-303 |
| Cow position: | chr25:18192198-18192527 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 311 |
| Conread position: | 2-294 |
| Cow position: | chr25:17655981-17655684 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 7-284 |
| Cow position: | chr25:12941118-12941420 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr25:13782600-13782285 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr25:18888191-18888490 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr25:20631177-20630880 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 221 |
| Conread position: | 7-284 |
| Cow position: | chr25:22149094-22148788 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 221 |
| Conread position: | 7-284 |
| Cow position: | chr25:25508260-25507954 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr25:27523056-27523345 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 185 |
| Conread position: | 7-284 |
| Cow position: | chr25:34345445-34345752 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 19, 256 |
| Conread position: | 15-284 |
| Cow position: | chr25:14956919-14957198 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 19-274 |
| Cow position: | chr25:13454055-13454323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 207 |
| Conread position: | 19-313 |
| Cow position: | chr25:19922082-19921756 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 297 |
| Conread position: | 22-270 |
| Cow position: | chr25:4532974-4533234 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 32-285 |
| Cow position: | chr25:30267016-30266743 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 21, 234 |
| Conread position: | 43-282 |
| Cow position: | chr25:24658702-24658959 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 116-284 |
| Cow position: | chr25:26900117-26899935 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.