Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-135 |
| Cow position: | chr27:29056672-29056527 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-244 |
| Cow position: | chr27:27415347-27415103 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 95 |
| Conread position: | 1-266 |
| Cow position: | chr27:798055-798345 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr27:19260210-19259908 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-284 |
| Cow position: | chr27:1677059-1677377 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr27:15274555-15274858 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr27:16032891-16033199 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-294 |
| Cow position: | chr27:25803184-25803494 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 198 |
| Conread position: | 1-295 |
| Cow position: | chr27:8735681-8735382 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 1-303 |
| Cow position: | chr27:167416-167720 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 2-294 |
| Cow position: | chr27:28079923-28079612 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 3-284 |
| Cow position: | chr27:26553921-26554192 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 7-180 |
| Cow position: | chr27:15035854-15036039 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 7-200 |
| Cow position: | chr27:19525059-19524851 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-233 |
| Cow position: | chr27:8199314-8199088 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 7-276 |
| Cow position: | chr27:12748542-12748242 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-282 |
| Cow position: | chr27:9331240-9330940 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr27:3234016-3234329 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 7-284 |
| Cow position: | chr27:9991707-9991993 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr27:13898818-13898528 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr27:26326567-26326273 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 213 |
| Conread position: | 7-284 |
| Cow position: | chr27:27664501-27664207 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 288 |
| Conread position: | 9-294 |
| Cow position: | chr27:4980876-4980568 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 296 |
| Conread position: | 13-219 |
| Cow position: | chr27:11083540-11083332 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 13-283 |
| Cow position: | chr27:23292760-23292483 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 17-273 |
| Cow position: | chr27:1576091-1575811 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 18-284 |
| Cow position: | chr27:15635850-15636140 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 19-284 |
| Cow position: | chr27:1210847-1210559 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 27-285 |
| Cow position: | chr27:16426206-16425933 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 31-277 |
| Cow position: | chr27:25085045-25084792 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 85-247 |
| Cow position: | chr27:16264771-16264598 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 100-279 |
| Cow position: | chr27:16552267-16552079 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.