Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-123
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-201
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-233
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 250

Conread position: 1-247
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 55

Conread position: 1-247
Cow position:
Alignm length: 270
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 1-250
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 129

Conread position: 1-252
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-253
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-253
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 266

Conread position: 1-254
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 19, 267

Conread position: 1-254
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 267

Conread position: 1-266
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 52

Conread position: 1-269
Cow position:
Alignm length: 294
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 134

Conread position: 1-274
Cow position:
Alignm length: 295
Alignm identity: 191
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-278
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 185

Conread position: 1-281
Cow position:
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 151

Conread position: 1-281
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 12

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 69

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 263

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 66

Conread position: 1-284
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 55

Conread position: 1-294
Cow position:
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 95

Conread position: 1-294
Cow position:
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 67

Conread position: 1-303
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-303
Cow position:
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 267

Conread position: 1-314
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 19

Conread position: 2-285
Cow position:
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 4-279
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 4-285
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 36

Conread position: 7-150
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 7-174
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 146

Conread position: 7-244
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 59

Conread position: 7-278
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-279
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 137

Conread position: 7-282
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 215

Conread position: 7-282
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 7-283
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 7-284
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 213

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 18, 195

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 18, 38

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 7-284
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 49

Conread position: 7-285
Cow position:
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 7-285
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 50

Conread position: 7-289
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 7-295
Cow position:
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 302

Conread position: 8-284
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 8-284
Cow position:
Alignm length: 294
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 231

Conread position: 9-178
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 9-235
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 9-284
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 258

Conread position: 14-270
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 182, 37

Conread position: 19-282
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 19-284
Cow position:
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 22-254
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 23

Conread position: 22-286
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 70

Conread position: 24-279
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 64

Conread position: 28-284
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 43

Conread position: 59-284
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 90-278
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 108-285
Cow position:
Alignm length: 192
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 111-279
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 29

Show alignments to all cow chromosomes.