Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-193
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 187

Conread position: 1-221
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1-222
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 61

Conread position: 1-222
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1-229
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 56

Conread position: 1-239
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-254
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 54

Conread position: 1-254
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 265

Conread position: 1-273
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 63

Conread position: 1-278
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 47

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 43

Conread position: 1-279
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 48

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 267

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 53

Conread position: 1-281
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 142

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 53

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 46

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 242

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 130

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-285
Cow position:
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 46

Conread position: 1-290
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 1-294
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 310

Conread position: 1-294
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 177

Conread position: 1-295
Cow position:
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 278

Conread position: 1-299
Cow position:
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 267

Conread position: 1-303
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 179

Conread position: 1-303
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 276

Conread position: 1-303
Cow position:
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 310

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 307

Conread position: 1-305
Cow position:
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 1-313
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-314
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 191

Conread position: 1-321
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 302

Conread position: 1-323
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 281

Conread position: 2-135
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 2-252
Cow position:
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 2-266
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 86

Conread position: 2-278
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 135

Conread position: 2-284
Cow position:
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 165

Conread position: 2-285
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 102, 43

Conread position: 3-279
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 3-279
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 4-303
Cow position:
Alignm length: 323
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 50

Conread position: 4-303
Cow position:
Alignm length: 325
Alignm identity: 240
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 65

Conread position: 6-254
Cow position:
Alignm length: 261
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 6-294
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 62

Conread position: 7-215
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 7-239
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 143

Conread position: 7-282
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 7-284
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 198

Conread position: 7-284
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 7-289
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 7-294
Cow position:
Alignm length: 314
Alignm identity: 239
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 18, 62

Conread position: 7-294
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 194

Conread position: 7-294
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 299

Conread position: 7-295
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 280

Conread position: 9-284
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 9-284
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 10-285
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 6

Conread position: 13-285
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 169

Conread position: 15-284
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 107, 49

Conread position: 16-284
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 53, 122

Conread position: 19-205
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 34, 47

Conread position: 19-242
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 39

Conread position: 19-273
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 25

Conread position: 19-276
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 72, 26

Conread position: 19-284
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 19-288
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 45

Conread position: 19-303
Cow position:
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 21-253
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 32

Conread position: 22-239
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 30

Conread position: 24-275
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 72

Conread position: 25-270
Cow position:
Alignm length: 261
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 135

Conread position: 29-223
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 12

Conread position: 31-284
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 33

Conread position: 34-271
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 120

Conread position: 59-256
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 59-279
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 71-235
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 104

Conread position: 93-284
Cow position:
Alignm length: 202
Alignm identity: 164
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 93-284
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 109-294
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 184

Conread position: 113-279
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 114-281
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 18

Show alignments to all cow chromosomes.