Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-88
Cow position:
Alignm length: 90
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 82

Conread position: 1-88
Cow position:
Alignm length: 90
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-129
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-135
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-145
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 129

Conread position: 1-150
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 143

Conread position: 1-180
Cow position:
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 1-202
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 153

Conread position: 1-222
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 1-254
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-254
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 63

Conread position: 1-254
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 67

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 66

Conread position: 1-270
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 1-271
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 47

Conread position: 1-279
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 191

Conread position: 1-279
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 43

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 68

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 55

Conread position: 1-279
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 147

Conread position: 1-279
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 183

Conread position: 1-281
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 56

Conread position: 1-281
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 28

Conread position: 1-283
Cow position:
Alignm length: 293
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 51

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 82

Conread position: 1-284
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 71

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-284
Cow position:
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 1-284
Cow position:
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 93, 22

Conread position: 1-285
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 46

Conread position: 1-285
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 1-286
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 47

Conread position: 1-288
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 1-294
Cow position:
Alignm length: 316
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 228

Conread position: 1-295
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 1-295
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 208

Conread position: 1-303
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 294

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 310

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-314
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-314
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 77

Conread position: 1-323
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 2-276
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 42

Conread position: 2-277
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 18

Conread position: 2-279
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 153

Conread position: 2-284
Cow position:
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 2-285
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 63, 43

Conread position: 6-284
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 63

Conread position: 7-185
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 7-190
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 49

Conread position: 7-252
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 22

Conread position: 7-257
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 47

Conread position: 7-279
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 37

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 150

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 182

Conread position: 7-284
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 207

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 150

Conread position: 7-284
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 49

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 17, 185

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 212

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 46

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 187

Conread position: 7-288
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 7-294
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 7-294
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 202

Conread position: 7-294
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 8-284
Cow position:
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 256

Conread position: 9-135
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 9-284
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 146

Conread position: 9-295
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 308

Conread position: 10-284
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 13-284
Cow position:
Alignm length: 292
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 16-263
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 34

Conread position: 19-194
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 19-284
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 254

Conread position: 19-284
Cow position:
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 19-284
Cow position:
Alignm length: 287
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 19-323
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 75, 32

Conread position: 20-271
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 52

Conread position: 20-277
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 54

Conread position: 22-279
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 94, 43

Conread position: 22-281
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 29

Conread position: 22-284
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 133

Conread position: 24-174
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 24-282
Cow position:
Alignm length: 265
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 194

Conread position: 25-294
Cow position:
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 16

Conread position: 27-284
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 28

Conread position: 33-295
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 58, 17

Conread position: 36-284
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 93

Conread position: 53-279
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 104, 54

Conread position: 58-270
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 51

Conread position: 64-234
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 21

Conread position: 90-250
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 95-310
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 203

Conread position: 115-289
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 128-295
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 168

Show alignments to all cow chromosomes.