Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-149
Cow position:
Alignm length: 157
Alignm identity: 133
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 1-166
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-224
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 52

Conread position: 1-224
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 114

Conread position: 1-229
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 1-234
Cow position:
Alignm length: 247
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 1-239
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 120

Conread position: 1-254
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 167

Conread position: 1-264
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-266
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 47

Conread position: 1-279
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 213

Conread position: 1-279
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 251

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-279
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-280
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 267

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 135

Conread position: 1-281
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 242

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 137

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 141

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 74

Conread position: 1-284
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 219

Conread position: 1-285
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 55

Conread position: 1-286
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 54

Conread position: 1-295
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 103

Conread position: 1-296
Cow position:
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-303
Cow position:
Alignm length: 332
Alignm identity: 245
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 197

Conread position: 1-303
Cow position:
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 160

Conread position: 1-303
Cow position:
Alignm length: 321
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 256

Conread position: 1-305
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 99

Conread position: 1-309
Cow position:
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 146

Conread position: 1-316
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 70

Conread position: 2-253
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 2-271
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 45

Conread position: 2-276
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 9

Conread position: 2-278
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 2-279
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 0

Conread position: 2-282
Cow position:
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 21

Conread position: 2-284
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-291
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 113

Conread position: 2-294
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 23, 54

Conread position: 4-242
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 4-288
Cow position:
Alignm length: 297
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 52, 23

Conread position: 4-303
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 315

Conread position: 6-266
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 252

Conread position: 7-128
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 7-194
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 164

Conread position: 7-195
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 20

Conread position: 7-197
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 7-224
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 7-224
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 7-227
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 124

Conread position: 7-228
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 220

Conread position: 7-235
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 216

Conread position: 7-235
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 146

Conread position: 7-257
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 214

Conread position: 7-270
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 121

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 46

Conread position: 7-284
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 211

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 62

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 221

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 203

Conread position: 7-284
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 47

Conread position: 7-285
Cow position:
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 7-291
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 18, 187

Conread position: 7-296
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 49

Conread position: 8-284
Cow position:
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 9-229
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 12, 128

Conread position: 9-284
Cow position:
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 227

Conread position: 10-279
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 36

Conread position: 13-254
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 79, 40

Conread position: 13-284
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 14

Conread position: 18-254
Cow position:
Alignm length: 243
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 123

Conread position: 19-254
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 73, 38

Conread position: 19-279
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 19-284
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 65

Conread position: 19-284
Cow position:
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 19-284
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 66

Conread position: 19-284
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 19-284
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 202

Conread position: 19-294
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 50

Conread position: 19-313
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 286

Conread position: 20-284
Cow position:
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 22-284
Cow position:
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 79

Conread position: 24-284
Cow position:
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 180

Conread position: 25-284
Cow position:
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 28-284
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 0

Conread position: 30-284
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 39-260
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 15

Conread position: 68-284
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 45

Conread position: 86-285
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 20, 9

Conread position: 95-281
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 97-282
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 160

Conread position: 108-275
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 127

Conread position: 116-282
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 131-284
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 140-284
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 53

Show alignments to all cow chromosomes.