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Cow genome map

           
Conread name:
           
reye1620b_c2r1.y1
        

               
Conread position:
               
5-283
               

               
Cow position:
               
chr17:5730510-5730805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr17:4213346-4213695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr17:21767531-21767725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
13-333
               

               
Cow position:
               
chr17:13966860-13966518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr17:22773741-22773399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr17:29083802-29084069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
20-334
               

               
Cow position:
               
chr17:33934145-33933817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 276
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr17:32138794-32138530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr17:11913098-11912807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr17:10529142-10528843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr17:17221947-17222238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 133
               

               
Conread position:
               
21-312
               

               
Cow position:
               
chr17:4635004-4634706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr17:13940715-13940409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
21-323
               

               
Cow position:
               
chr17:14026299-14025996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
21-325
               

               
Cow position:
               
chr17:23517564-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
21-326
               

               
Cow position:
               
chr17:20800418-20800739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
21-328
               

               
Cow position:
               
chr17:3154167-3153843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:77113-76785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:5810004-5809676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:11056774-11056445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:20083910-20083590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 267
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:22774992-22775298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:23063317-23063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:32651219-32651542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr17:42026138-42026466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-330
               

               
Cow position:
               
chr17:5695341-5695018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr17:3196984-3196654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr17:24823867-24824179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr17:30539647-30539322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 278
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr17:1410642-1410308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr17:21038883-21039210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:1970804-1971143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:6566081-6566401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 141
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:18099424-18099105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:22248600-22248264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:26764615-26764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr17:27667591-27667255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:399962-399625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:3743816-3744153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:5548898-5548561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:5805838-5805501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:6145412-6145749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:6612675-6613012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:6956292-6956631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:7585072-7585409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:8213890-8214227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:9663100-9662763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:9914210-9914547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:10008962-10008625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:11677584-11677247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:11786576-11786913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:12658040-12657704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:12856904-12857241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:14212368-14212030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:15318944-15319281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:15439443-15439779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:16874237-16874574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:17259880-17260217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:17493943-17494280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:18564157-18563820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:19317566-19317903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:19370805-19370468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:19377498-19377161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:20391427-20391764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:20546790-20547127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:21212435-21212098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:21439487-21439822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:21660113-21659781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:22087275-22087605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:27986234-27985897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:28155706-28155369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:31986548-31986211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:33058956-33058620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:34564999-34565336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:35437696-35438033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:36197223-36197560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:36284920-36285251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:36413382-36413045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:37528095-37527758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr17:39823541-39823204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr17:23337412-23337081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr17:5767503-5767851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
21-341
               

               
Cow position:
               
chr17:1025897-1026211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
21-341
               

               
Cow position:
               
chr17:23101612-23101268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
21-343
               

               
Cow position:
               
chr17:41029548-41029893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr17:13409729-13409422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr17:7396640-7396302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
23-203
               

               
Cow position:
               
chr17:10432807-10432626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr17:11382111-11381792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr17:12059488-12059168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 198
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr17:33272058-33271761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr17:32989097-32989413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr17:32994009-32993687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr17:5541967-5541632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr17:27791140-27790805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
23-339
               

               
Cow position:
               
chr17:15188468-15188141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
24-344
               

               
Cow position:
               
chr17:40405912-40406250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
27-299
               

               
Cow position:
               
chr17:3684049-3683763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 147
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr17:31531970-31532300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr17:43725903-43725572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-342
               

               
Cow position:
               
chr17:4152614-4152279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr17:6072189-6072514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr17:33289043-33288724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr17:5281689-5281363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr17:6263519-6263846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr17:8223365-8223690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr17:11471518-11471842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr17:18312118-18312444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
30-354
               

               
Cow position:
               
chr17:1493545-1493204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 232
               

               
Conread position:
               
31-295
               

               
Cow position:
               
chr17:18036360-18036097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
31-301
               

               
Cow position:
               
chr17:15300252-15299975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr17:28130428-28130109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr17:41394082-41393823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
32-333
               

               
Cow position:
               
chr17:41400356-41400040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr17:15854413-15854727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr17:21494990-21495310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr17:6082161-6082465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
39-334
               

               
Cow position:
               
chr17:13922099-13922410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
41-334
               

               
Cow position:
               
chr17:26818810-26818518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
46-291
               

               
Cow position:
               
chr17:5740205-5740452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
46-336
               

               
Cow position:
               
chr17:21960051-21959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
49-334
               

               
Cow position:
               
chr17:25542182-25541882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr17:12216416-12216142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
89-337
               

               
Cow position:
               
chr17:17032936-17032681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
91-265
               

               
Cow position:
               
chr17:14050506-14050331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-283
               

               
Cow position:
               
chr17:23803152-23803349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
91-286
               

               
Cow position:
               
chr17:2270454-2270652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr17:25145624-25145411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr17:25344254-25344043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr17:2274960-2275169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 184
               

               
Conread position:
               
91-323
               

               
Cow position:
               
chr17:6180692-6180929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr17:6155727-6155966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 190
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr17:10473521-10473757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr17:11304720-11304962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr17:21680454-21680698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr17:25590538-25590309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr17:18627914-18628156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr17:26182908-26183147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr17:1105235-1105477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-333
               

               
Cow position:
               
chr17:6858706-6858457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:5174433-5174180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:10025714-10025461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:13999319-13999066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:14239749-14239496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:15040719-15040466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:15293849-15293596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:16505009-16504759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:21716459-21716206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:21926396-21926643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:24095027-24094774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:25195429-25195682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:27863844-27864097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:30225073-30224820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr17:42843738-42843991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-338
               

               
Cow position:
               
chr17:3095518-3095764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
91-338
               

               
Cow position:
               
chr17:13237035-13236789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
91-338
               

               
Cow position:
               
chr17:42398121-42398372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-340
               

               
Cow position:
               
chr17:20022831-20022579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr17:17983087-17982832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr17:22790785-22790994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
92-325
               

               
Cow position:
               
chr17:25875096-25875331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
92-327
               

               
Cow position:
               
chr17:3498977-3498742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
92-329
               

               
Cow position:
               
chr17:255763-256005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
92-329
               

               
Cow position:
               
chr17:27679557-27679314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr17:10254634-10254886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr17:10354375-10354123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr17:26822782-26823034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr17:29364491-29364742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr17:34235512-34235260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-341
               

               
Cow position:
               
chr17:4606659-4606899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
92-342
               

               
Cow position:
               
chr17:24077093-24077345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr17:39790374-39790609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
93-329
               

               
Cow position:
               
chr17:22563884-22564107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr17:22226571-22226318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr17:6065407-6065648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr17:18410836-18410586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
95-331
               

               
Cow position:
               
chr17:3306559-3306795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr17:10318823-10319070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
100-329
               

               
Cow position:
               
chr17:11171491-11171722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
100-337
               

               
Cow position:
               
chr17:13871245-13871489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr17:24973650-24973883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr17:27069192-27069408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
161-339
               

               
Cow position:
               
chr17:13124979-13124795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
182-338
               

               
Cow position:
               
chr17:21017573-21017733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
186-334
               

               
Cow position:
               
chr17:3182801-3182653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
187-336
               

               
Cow position:
               
chr17:20072290-20072148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
227-334
               

               
Cow position:
               
chr17:12590988-12591098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               
Show alignments to all cow chromosomes.