Cow genome map
| Conread name: | reye1620b_c2r1.y1 |
| Conread position: | 1-330 |
| Cow position: | chr18:3166970-3166637 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 176 |
| Conread position: | 11-336 |
| Cow position: | chr18:44235716-44236065 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 12-336 |
| Cow position: | chr18:43284231-43283897 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 67, 158 |
| Conread position: | 13-329 |
| Cow position: | chr18:5457731-5457408 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 10, 158 |
| Conread position: | 13-329 |
| Cow position: | chr18:36524681-36524354 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 13-330 |
| Cow position: | chr18:47183763-47183429 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 13-332 |
| Cow position: | chr18:81284-81613 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 13-334 |
| Cow position: | chr18:50082712-50082392 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 13-339 |
| Cow position: | chr18:21251514-21251846 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 155 |
| Conread position: | 15-329 |
| Cow position: | chr18:33272469-33272795 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 272 |
| Conread position: | 18-334 |
| Cow position: | chr18:29065837-29065516 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 59, 145 |
| Conread position: | 18-339 |
| Cow position: | chr18:16227093-16227429 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 146 |
| Conread position: | 20-316 |
| Cow position: | chr18:8761060-8761366 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 148 |
| Conread position: | 21-256 |
| Cow position: | chr18:6878098-6877849 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 21-283 |
| Cow position: | chr18:11262492-11262767 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 21-290 |
| Cow position: | chr18:4556857-4556569 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 154 |
| Conread position: | 21-327 |
| Cow position: | chr18:45104898-45104590 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 21-328 |
| Cow position: | chr18:7359290-7359591 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 21-329 |
| Cow position: | chr18:1733638-1733344 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 45 |
| Conread position: | 21-329 |
| Cow position: | chr18:30386129-30385800 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 21-330 |
| Cow position: | chr18:50637933-50637605 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 21-331 |
| Cow position: | chr18:14048251-14048569 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 21-332 |
| Cow position: | chr18:29387766-29388075 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 21-333 |
| Cow position: | chr18:28101155-28101488 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 21-333 |
| Cow position: | chr18:29058952-29058637 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 142 |
| Conread position: | 21-333 |
| Cow position: | chr18:35364241-35363911 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 21-334 |
| Cow position: | chr18:30793989-30794292 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 179, 30 |
| Conread position: | 21-335 |
| Cow position: | chr18:49543019-49543335 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 126 |
| Conread position: | 21-336 |
| Cow position: | chr18:2609188-2608867 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 59 |
| Conread position: | 21-336 |
| Cow position: | chr18:25164999-25164667 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 21-336 |
| Cow position: | chr18:27428975-27429308 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 21-336 |
| Cow position: | chr18:27529893-27530228 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 21-336 |
| Cow position: | chr18:39709419-39709751 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 21-336 |
| Cow position: | chr18:40141360-40141026 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 150 |
| Conread position: | 21-336 |
| Cow position: | chr18:43563752-43564090 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 192 |
| Conread position: | 21-336 |
| Cow position: | chr18:49655240-49655566 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 175 |
| Conread position: | 21-337 |
| Cow position: | chr18:1611291-1611628 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:11251506-11251169 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:13270778-13271115 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:18215146-18214809 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:24036975-24036638 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:25957969-25958305 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:26485271-26485608 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:26883598-26883934 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:27555026-27554688 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 21-337 |
| Cow position: | chr18:27798276-27797939 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:27995555-27995892 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:28086691-28087028 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:30677190-30677527 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:31139625-31139962 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 149 |
| Conread position: | 21-337 |
| Cow position: | chr18:31201905-31202242 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:32019990-32019653 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:33616546-33616209 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:33907682-33907345 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:37314850-37314513 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:40253125-40252788 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:42421876-42421539 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:43473462-43473789 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 252 |
| Conread position: | 21-337 |
| Cow position: | chr18:43538993-43539330 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:51346164-51346501 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:51458969-51458633 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:51579909-51579572 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:51601791-51601454 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:52629382-52629045 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 21-337 |
| Cow position: | chr18:54071955-54071618 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:55417858-55418195 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 21-337 |
| Cow position: | chr18:55436258-55435921 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 21-339 |
| Cow position: | chr18:10655986-10656308 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 277 |
| Conread position: | 21-340 |
| Cow position: | chr18:4672871-4673178 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 21-341 |
| Cow position: | chr18:33407167-33407482 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 21-341 |
| Cow position: | chr18:34051088-34050747 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 153 |
| Conread position: | 22-337 |
| Cow position: | chr18:42425449-42425784 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 152 |
| Conread position: | 23-258 |
| Cow position: | chr18:2864674-2864425 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 23-325 |
| Cow position: | chr18:52635550-52635236 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 23-326 |
| Cow position: | chr18:7951746-7952051 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 144 |
| Conread position: | 23-329 |
| Cow position: | chr18:23631047-23630721 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 154 |
| Conread position: | 23-331 |
| Cow position: | chr18:13293040-13293365 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 23-334 |
| Cow position: | chr18:33299440-33299759 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 23-334 |
| Cow position: | chr18:51211698-51212044 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 23-335 |
| Cow position: | chr18:4858362-4858044 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 23-336 |
| Cow position: | chr18:19193814-19193506 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 23-337 |
| Cow position: | chr18:54365657-54365323 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 25-329 |
| Cow position: | chr18:31672974-31672661 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 25-334 |
| Cow position: | chr18:38686635-38686952 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 27-338 |
| Cow position: | chr18:601635-601317 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 28-326 |
| Cow position: | chr18:4707750-4707434 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 146 |
| Conread position: | 28-337 |
| Cow position: | chr18:23660846-23661176 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 146 |
| Conread position: | 30-323 |
| Cow position: | chr18:51691930-51691617 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 30-329 |
| Cow position: | chr18:54033580-54033895 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 144 |
| Conread position: | 30-333 |
| Cow position: | chr18:23700331-23700012 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 144 |
| Conread position: | 30-336 |
| Cow position: | chr18:22121342-22121021 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 146 |
| Conread position: | 30-336 |
| Cow position: | chr18:23802905-23803223 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 30-336 |
| Cow position: | chr18:28968404-28968077 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 144 |
| Conread position: | 30-337 |
| Cow position: | chr18:22396542-22396214 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 31-299 |
| Cow position: | chr18:51679334-51679049 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 31-300 |
| Cow position: | chr18:16050546-16050266 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 31-325 |
| Cow position: | chr18:51713170-51712856 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 31-336 |
| Cow position: | chr18:41837230-41836907 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 31-341 |
| Cow position: | chr18:11322128-11322461 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 32-334 |
| Cow position: | chr18:6290319-6290645 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 32-334 |
| Cow position: | chr18:27078399-27078703 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 34-341 |
| Cow position: | chr18:16418151-16417830 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 35-336 |
| Cow position: | chr18:11866892-11867200 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 46-339 |
| Cow position: | chr18:22092343-22092640 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 48-334 |
| Cow position: | chr18:47511555-47511856 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 86-337 |
| Cow position: | chr18:56045782-56046039 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 90-323 |
| Cow position: | chr18:38670493-38670263 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 90-336 |
| Cow position: | chr18:32244410-32244162 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 191 |
| Conread position: | 90-339 |
| Cow position: | chr18:1023402-1023646 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 91-266 |
| Cow position: | chr18:1584592-1584421 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 91-272 |
| Cow position: | chr18:30360507-30360323 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 91-325 |
| Cow position: | chr18:7322348-7322586 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 91-326 |
| Cow position: | chr18:27799919-27799682 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 91-329 |
| Cow position: | chr18:9029239-9029475 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 91-329 |
| Cow position: | chr18:11191036-11191283 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 207 |
| Conread position: | 91-329 |
| Cow position: | chr18:21938968-21939208 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 91-329 |
| Cow position: | chr18:22874485-22874726 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 91-329 |
| Cow position: | chr18:24712056-24711814 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 91-330 |
| Cow position: | chr18:18340340-18340114 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 91-334 |
| Cow position: | chr18:4535371-4535129 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 59 |
| Conread position: | 91-334 |
| Cow position: | chr18:6881716-6881490 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 91-334 |
| Cow position: | chr18:13508113-13507881 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 91-334 |
| Cow position: | chr18:25003264-25003023 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 91-334 |
| Cow position: | chr18:55462096-55461850 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 91-335 |
| Cow position: | chr18:35076000-35076244 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 91-336 |
| Cow position: | chr18:26844033-26843790 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 91-336 |
| Cow position: | chr18:36458547-36458793 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 91-336 |
| Cow position: | chr18:41853307-41853058 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 91-337 |
| Cow position: | chr18:15911397-15911144 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 91-337 |
| Cow position: | chr18:24590744-24590993 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 91-337 |
| Cow position: | chr18:32755170-32755423 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 91-337 |
| Cow position: | chr18:36632297-36632045 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 91-337 |
| Cow position: | chr18:42608716-42608462 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 91-337 |
| Cow position: | chr18:43393433-43393686 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 91-337 |
| Cow position: | chr18:55022204-55021951 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 91-341 |
| Cow position: | chr18:21682355-21682108 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 91-343 |
| Cow position: | chr18:1663118-1662862 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 91-343 |
| Cow position: | chr18:55697402-55697145 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 67 |
| Conread position: | 91-352 |
| Cow position: | chr18:1664089-1664350 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 92-298 |
| Cow position: | chr18:11376985-11377184 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 92-328 |
| Cow position: | chr18:16842452-16842214 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 194 |
| Conread position: | 92-329 |
| Cow position: | chr18:4624815-4624581 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 184 |
| Conread position: | 92-329 |
| Cow position: | chr18:16134693-16134454 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 92-335 |
| Cow position: | chr18:19977364-19977115 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 92-336 |
| Cow position: | chr18:4796583-4796832 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 92-336 |
| Cow position: | chr18:51485549-51485800 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 92-336 |
| Cow position: | chr18:54656903-54657155 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 92-337 |
| Cow position: | chr18:3190705-3190956 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 92-337 |
| Cow position: | chr18:24599928-24599677 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 92-337 |
| Cow position: | chr18:31309736-31309988 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 92-337 |
| Cow position: | chr18:40196072-40196324 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 92-337 |
| Cow position: | chr18:43226335-43226084 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 94-336 |
| Cow position: | chr18:21810665-21810416 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 94-338 |
| Cow position: | chr18:10103229-10103478 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 95-333 |
| Cow position: | chr18:35818382-35818143 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 105-344 |
| Cow position: | chr18:49660413-49660175 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 117-332 |
| Cow position: | chr18:54974351-54974132 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 161-341 |
| Cow position: | chr18:55001054-55000871 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 53 |
| Conread position: | 167-339 |
| Cow position: | chr18:46135011-46135179 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 184-341 |
| Cow position: | chr18:31082612-31082462 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 185-332 |
| Cow position: | chr18:36265074-36264930 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 186-336 |
| Cow position: | chr18:54658011-54658159 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 187-329 |
| Cow position: | chr18:47779167-47779309 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 206-336 |
| Cow position: | chr18:48453423-48453554 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 208-336 |
| Cow position: | chr18:52402785-52402656 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
Show alignments to all cow chromosomes.