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Cow genome map

           
Conread name:
           
reye1620b_c2r1.y1
        

               
Conread position:
               
1-327
               

               
Cow position:
               
chr21:44108626-44108950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 159
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr21:30232091-30231751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr21:7038249-7037901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr21:30566649-30566970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr21:42500653-42500986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr21:38900397-38900734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr21:29954835-29955182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 163
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr21:36225363-36225709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
13-339
               

               
Cow position:
               
chr21:19766470-19766814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 272
               

               
Conread position:
               
14-326
               

               
Cow position:
               
chr21:37299082-37299415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
14-334
               

               
Cow position:
               
chr21:7582287-7581952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 160
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr21:4732595-4732256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr21:14727681-14727896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr21:48638118-48637856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr21:31691121-31691398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
21-327
               

               
Cow position:
               
chr21:33983185-33982858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:4905343-4905020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:7717162-7716838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:10436795-10437122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:12366012-12366336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:19062323-19062624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
134, 99
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:22855847-22856167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:38917860-38918163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:40244059-40244388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:48484815-48484503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr21:612142-611818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr21:23606300-23606626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr21:5857511-5857179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr21:19614199-19614531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr21:725263-724932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr21:24130711-24131034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr21:36297121-36297444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 58
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr21:38691820-38692140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
21-335
               

               
Cow position:
               
chr21:34899729-34899394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:19626755-19626418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:24607021-24607347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:27376075-27376409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:32191805-32192131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:32535610-32535931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr21:39700451-39700115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:1179311-1178975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:2709935-2709598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:7525072-7525409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:11509891-11510228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:13632515-13632851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:13735207-13734867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:16575492-16575155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:16794965-16795302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:17539359-17539696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:18574469-18574806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:21103673-21104011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:21624039-21624376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:21909980-21910317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:22100245-22099908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:23329387-23329050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:25480214-25480551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:25598619-25598955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:26854738-26854401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:26875546-26875886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:27036403-27036740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:30134744-30135078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:30571125-30570788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:30655594-30655931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:30965987-30965651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:31039727-31039390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:33709545-33709208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:33770632-33770969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:33901381-33901720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:34074592-34074929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:34900630-34900967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:38848845-38848508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:39224993-39224656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:40479216-40479553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:41795769-41795432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:44122680-44123017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr21:47429295-47429631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr21:18979230-18978889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr21:29424013-29424343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr21:37352786-37352465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr21:18494605-18494928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr21:24796409-24796079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 145
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr21:32297877-32297548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr21:34391341-34391016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
22-299
               

               
Cow position:
               
chr21:6697466-6697176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 151
               

               
Conread position:
               
22-333
               

               
Cow position:
               
chr21:16612255-16612578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
56, 266
               

               
Conread position:
               
22-335
               

               
Cow position:
               
chr21:3813841-3813528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr21:11143894-11143560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
23-282
               

               
Cow position:
               
chr21:9981061-9980799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
23-283
               

               
Cow position:
               
chr21:45971525-45971254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr21:19702151-19702445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
23-327
               

               
Cow position:
               
chr21:27341958-27341657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
23-328
               

               
Cow position:
               
chr21:4794848-4795175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr21:16327316-16327024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr21:17262485-17262168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
23-330
               

               
Cow position:
               
chr21:2366968-2367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
23-330
               

               
Cow position:
               
chr21:44826238-44825935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr21:12616770-12617089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr21:81697-82035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr21:27230164-27229838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr21:33209826-33210158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr21:451831-452166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr21:9743952-9743617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr21:20370322-20370657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
25-329
               

               
Cow position:
               
chr21:30626553-30626233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
28-331
               

               
Cow position:
               
chr21:19363818-19363512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr21:2472815-2472485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr21:11292670-11293000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr21:30688557-30688231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
29-329
               

               
Cow position:
               
chr21:32447175-32447495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr21:3818745-3819058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr21:3782734-3783061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr21:47649305-47649628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
31-263
               

               
Cow position:
               
chr21:2657226-2657472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr21:5840808-5841112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr21:2495536-2495221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr21:21785452-21785134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr21:33729069-33729382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
31-332
               

               
Cow position:
               
chr21:23801477-23801176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr21:2877877-2877551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
32-197
               

               
Cow position:
               
chr21:42136208-42136034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr21:2935113-2934797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr21:10151444-10151751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr21:12153770-12154086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr21:37479596-37479908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr21:20162172-20162493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr21:36973177-36972852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr21:5238044-5238315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
37-327
               

               
Cow position:
               
chr21:42190517-42190230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
40-336
               

               
Cow position:
               
chr21:41032925-41033236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
46-329
               

               
Cow position:
               
chr21:46849453-46849177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr21:641243-641530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
80-329
               

               
Cow position:
               
chr21:25127308-25127550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
90-329
               

               
Cow position:
               
chr21:11707042-11706799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr21:36642615-36642857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
90-337
               

               
Cow position:
               
chr21:38651213-38650964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
91-269
               

               
Cow position:
               
chr21:29225350-29225172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-281
               

               
Cow position:
               
chr21:32814100-32813908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-283
               

               
Cow position:
               
chr21:40265542-40265737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-326
               

               
Cow position:
               
chr21:7452416-7452178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-327
               

               
Cow position:
               
chr21:42464132-42463887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr21:23683259-23683499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr21:31278491-31278730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr21:47823558-47823323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr21:17282412-17282661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr21:24858020-24858271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr21:32237009-32237251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr21:39401309-39401550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:661898-661645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:2491081-2490828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:2514883-2515129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:3364498-3364751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:5790934-5791187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:13168859-13169112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:15905531-15905782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 178
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:19501734-19501987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:21963187-21963440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:25076679-25076426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:26071443-26071190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:33235507-33235760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:34909900-34910153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:35068071-35068324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:39561306-39561559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr21:45372064-45372317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-339
               

               
Cow position:
               
chr21:10263751-10263992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
91-339
               

               
Cow position:
               
chr21:38120812-38121060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-341
               

               
Cow position:
               
chr21:28512250-28512492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
91-341
               

               
Cow position:
               
chr21:28734203-28733951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr21:48262845-48263052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
92-329
               

               
Cow position:
               
chr21:697275-697039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
92-329
               

               
Cow position:
               
chr21:5344371-5344604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr21:24236823-24237074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
93-332
               

               
Cow position:
               
chr21:28993915-28993670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr21:44755065-44754824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
94-341
               

               
Cow position:
               
chr21:3236244-3236485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
95-331
               

               
Cow position:
               
chr21:5392825-5392589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr21:1457906-1457659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
99-273
               

               
Cow position:
               
chr21:29954710-29954533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr21:3585616-3585407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr21:5636965-5636762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
167-327
               

               
Cow position:
               
chr21:15445292-15445131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
168-334
               

               
Cow position:
               
chr21:28626029-28626194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
179-336
               

               
Cow position:
               
chr21:28907845-28907691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
182-335
               

               
Cow position:
               
chr21:18842436-18842279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr21:6051311-6051463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr21:12801939-12801791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
185-339
               

               
Cow position:
               
chr21:29002357-29002199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
185-345
               

               
Cow position:
               
chr21:27569353-27569195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr21:13488337-13488476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               
Show alignments to all cow chromosomes.