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Cow genome map

           
Conread name:
           
reye1620b_c2r1.y1
        

               
Conread position:
               
8-334
               

               
Cow position:
               
chr22:18925897-18926242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 168
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr22:8329105-8329429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr22:38949368-38949045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr22:1289957-1289630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chr22:30472604-30472927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr22:25432341-25432686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr22:11643159-11642814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
13-339
               

               
Cow position:
               
chr22:15859562-15859895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 154
               

               
Conread position:
               
13-339
               

               
Cow position:
               
chr22:15951326-15950980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
13-339
               

               
Cow position:
               
chr22:23742153-23741795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
6, 130
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr22:6610791-6610468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr22:30689184-30689519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr22:31497555-31497214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr22:13950735-13951064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr22:3270053-3269814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr22:11837643-11837351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
21-297
               

               
Cow position:
               
chr22:21330888-21330595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr22:13859973-13860252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr22:25336934-25337230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-326
               

               
Cow position:
               
chr22:26799759-26799435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-328
               

               
Cow position:
               
chr22:30870401-30870076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
21-328
               

               
Cow position:
               
chr22:45106353-45106037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr22:19241631-19241303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr22:32944230-32944558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr22:48260898-48261198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 136
               

               
Conread position:
               
21-330
               

               
Cow position:
               
chr22:14245840-14245551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
21-330
               

               
Cow position:
               
chr22:32892258-32892582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 198
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr22:911666-911982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr22:14882553-14882225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr22:36555369-36555050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr22:41136879-41137200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr22:299584-299917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr22:8323810-8324135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr22:26098050-26097734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr22:45365680-45366013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr22:864949-864631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr22:41271428-41271112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:779937-780264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:1610197-1609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:6123327-6123011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:7913042-7913369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 136
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:26106615-26106947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 268
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:28071116-28071446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:28370505-28370836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:994885-995223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:1274604-1274267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:4930561-4930224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:5312999-5313336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:5368842-5369179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:5640445-5640108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:6130630-6130293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:6173155-6172827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:6623660-6623997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:6755389-6755053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:7360049-7359712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:9969290-9968953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:10578530-10578863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:10906424-10906087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:11127868-11128206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:12901774-12902111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:13329437-13329100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:13553135-13553472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:18031005-18031337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:25645972-25645635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:26088469-26088148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:27243516-27243853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:27306194-27305856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:27337383-27337046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:29624199-29624536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:29855629-29855966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:32709831-32709494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:35639956-35640294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:37031848-37031511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:39254958-39255294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:39903163-39903500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:40828285-40827948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:41240808-41241145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:42923301-42922965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:44365428-44365091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr22:44496656-44496991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr22:17295365-17295041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
21-338
               

               
Cow position:
               
chr22:30954597-30954927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 267
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr22:11200614-11200928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr22:33094118-33094454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
21-340
               

               
Cow position:
               
chr22:30674955-30674617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-341
               

               
Cow position:
               
chr22:8840154-8840481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
21-362
               

               
Cow position:
               
chr22:33196274-33195914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
22-324
               

               
Cow position:
               
chr22:15759922-15760230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 133
               

               
Conread position:
               
22-329
               

               
Cow position:
               
chr22:25246469-25246791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr22:11489102-11489417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 241
               

               
Conread position:
               
22-331
               

               
Cow position:
               
chr22:13299988-13300297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
22-332
               

               
Cow position:
               
chr22:8357173-8357499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
22-333
               

               
Cow position:
               
chr22:4645337-4645659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
22-333
               

               
Cow position:
               
chr22:26081337-26081008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr22:38107258-38107583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr22:40720724-40720397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr22:15398083-15397747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr22:46566192-46565856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chr22:46582876-46582540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
23-299
               

               
Cow position:
               
chr22:26151557-26151267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr22:14091668-14091382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr22:40399767-40400056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr22:17813797-17814106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 134
               

               
Conread position:
               
23-329
               

               
Cow position:
               
chr22:27818560-27818881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 282
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr22:41971593-41971272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
23-333
               

               
Cow position:
               
chr22:18258787-18259110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr22:21011953-21012279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
23-336
               

               
Cow position:
               
chr22:45513959-45513625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr22:3274575-3274242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr22:5836792-5837122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 241
               

               
Conread position:
               
23-338
               

               
Cow position:
               
chr22:22155161-22155496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr22:12381477-12381791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
25-334
               

               
Cow position:
               
chr22:40348907-40349237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 151
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr22:8732996-8732670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr22:25743402-25743064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr22:13620180-13619850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr22:16048068-16048398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr22:19574500-19574170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
29-281
               

               
Cow position:
               
chr22:34615877-34616143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
29-337
               

               
Cow position:
               
chr22:45039717-45040046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr22:16883661-16883345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr22:17074644-17074959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr22:22048410-22048091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
30-330
               

               
Cow position:
               
chr22:13889491-13889798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 276
               

               
Conread position:
               
30-334
               

               
Cow position:
               
chr22:17993463-17993145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr22:10685511-10685199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr22:34172241-34172569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr22:8283551-8283862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr22:18807454-18807136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr22:18811134-18810816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr22:11612996-11613312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
31-340
               

               
Cow position:
               
chr22:36193437-36193747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr22:44740676-44740971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
33-332
               

               
Cow position:
               
chr22:36583059-36582746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr22:44717292-44717597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr22:1342313-1342622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr22:10161537-10161852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
35-338
               

               
Cow position:
               
chr22:21890787-21890465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
41-333
               

               
Cow position:
               
chr22:4119990-4119679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
46-339
               

               
Cow position:
               
chr22:1068330-1068021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
58-333
               

               
Cow position:
               
chr22:41983101-41982829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
84-337
               

               
Cow position:
               
chr22:5343393-5343652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
90-333
               

               
Cow position:
               
chr22:1382803-1383051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr22:29881812-29881609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr22:18837899-18838104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr22:34608623-34608853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-327
               

               
Cow position:
               
chr22:3960654-3960409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:11987572-11987333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:13206202-13205959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:19592053-19592300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:28938266-28938019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:33901433-33901196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr22:34712363-34712599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr22:33201137-33201375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
91-333
               

               
Cow position:
               
chr22:2414408-2414657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-333
               

               
Cow position:
               
chr22:29866120-29866369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-333
               

               
Cow position:
               
chr22:36569900-36569663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:4017118-4017364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:10631017-10631263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:20626484-20626728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:27066001-27066252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:39508389-39508155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
91-335
               

               
Cow position:
               
chr22:12572841-12573096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
91-335
               

               
Cow position:
               
chr22:14925078-14924844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr22:5337955-5337708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr22:22054059-22054307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:171679-171933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:1907678-1907931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:11778971-11778721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:13640784-13641037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:15012826-15012573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:17191420-17191673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:19503485-19503739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:21244300-21244553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:21817578-21817831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:22588795-22588542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:24631919-24632172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:25235508-25235255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:27281686-27281939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:27616719-27616466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:28135883-28135631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:32338642-32338895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-337
               

               
Cow position:
               
chr22:39246972-39247225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-339
               

               
Cow position:
               
chr22:15337759-15338011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
91-339
               

               
Cow position:
               
chr22:16620821-16621062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
91-340
               

               
Cow position:
               
chr22:17936321-17936065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
91-343
               

               
Cow position:
               
chr22:27514306-27514566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
92-328
               

               
Cow position:
               
chr22:4535680-4535443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
206, 66
               

               
Conread position:
               
92-332
               

               
Cow position:
               
chr22:9734502-9734739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr22:11233082-11232830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr22:12671944-12671693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr22:15558534-15558283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr22:22278956-22279208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-339
               

               
Cow position:
               
chr22:22243300-22243046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
92-341
               

               
Cow position:
               
chr22:25476709-25476957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
93-244
               

               
Cow position:
               
chr22:21264116-21263962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
93-300
               

               
Cow position:
               
chr22:12569631-12569422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr22:17950309-17950100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
93-333
               

               
Cow position:
               
chr22:29290492-29290247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr22:19788038-19787791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 215
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr22:38940303-38940059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
95-337
               

               
Cow position:
               
chr22:36066821-36066572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr22:41374430-41374183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr22:23856713-23856938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
165-336
               

               
Cow position:
               
chr22:1822153-1821984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
176-334
               

               
Cow position:
               
chr22:6493903-6494058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr22:24066497-24066345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr22:34750415-34750567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr22:35533617-35533471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr22:45685294-45685136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
187-335
               

               
Cow position:
               
chr22:31593121-31592970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.