Cow genome map

Conread name: reye1620b_c2r1.y1

Conread position: 1-283
Cow position: chrX:39556252-39555949 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 39

Conread position: 2-170
Cow position: chrX:2366935-2367103 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 158

Conread position: 7-337
Cow position: chrX:35533423-35533776 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 169

Conread position: 12-324
Cow position: chrX:32871209-32870876 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 7, 164

Conread position: 12-333
Cow position: chrX:40269053-40269404 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 164

Conread position: 12-336
Cow position: chrX:37781502-37781192 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 289, 54

Conread position: 13-329
Cow position: chrX:28513651-28513987 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 158

Conread position: 13-331
Cow position: chrX:44054382-44054716 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 6, 163

Conread position: 13-337
Cow position: chrX:671431-671084 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 163

Conread position: 13-337
Cow position: chrX:8434625-8434282 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 159

Conread position: 13-338
Cow position: chrX:4325914-4325569 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 147

Conread position: 18-337
Cow position: chrX:14598431-14598770 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 155

Conread position: 20-327
Cow position: chrX:4123423-4123741 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 153

Conread position: 20-329
Cow position: chrX:38967238-38967559 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 145

Conread position: 21-291
Cow position: chrX:2351650-2351938 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 143

Conread position: 21-299
Cow position: chrX:9651458-9651163 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 181

Conread position: 21-300
Cow position: chrX:12096658-12096372 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 152

Conread position: 21-300
Cow position: chrX:21862082-21861790 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 96

Conread position: 21-300
Cow position: chrX:45373695-45373409 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 144

Conread position: 21-316
Cow position: chrX:917789-917474 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 218

Conread position: 21-322
Cow position: chrX:8899613-8899933 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 152

Conread position: 21-322
Cow position: chrX:27705181-27705486 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 32

Conread position: 21-329
Cow position: chrX:1055804-1055481 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 7

Conread position: 21-329
Cow position: chrX:4633269-4632940 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 158

Conread position: 21-329
Cow position: chrX:7119056-7118728 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 162

Conread position: 21-329
Cow position: chrX:15486037-15485715 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 153

Conread position: 21-329
Cow position: chrX:16790229-16789930 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 133

Conread position: 21-329
Cow position: chrX:22812650-22812976 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 153

Conread position: 21-329
Cow position: chrX:28847294-28846970 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 48, 158

Conread position: 21-329
Cow position: chrX:36535147-36534819 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-331
Cow position: chrX:17794583-17794897 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 152

Conread position: 21-333
Cow position: chrX:12309798-12309470 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 56, 39

Conread position: 21-333
Cow position: chrX:45237054-45237387 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 152

Conread position: 21-333
Cow position: chrX:48287843-48287533 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 144

Conread position: 21-334
Cow position: chrX:7571491-7571820 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 57, 156

Conread position: 21-334
Cow position: chrX:13648196-13647868 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 59, 163

Conread position: 21-334
Cow position: chrX:20582618-20582945 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 153

Conread position: 21-335
Cow position: chrX:17497684-17498003 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 155

Conread position: 21-336
Cow position: chrX:1781493-1781830 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-336
Cow position: chrX:3654197-3654527 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 143

Conread position: 21-336
Cow position: chrX:5892816-5893152 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 162

Conread position: 21-336
Cow position: chrX:11083026-11082695 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 154

Conread position: 21-336
Cow position: chrX:11949905-11949573 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 153

Conread position: 21-336
Cow position: chrX:12249389-12249722 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 152

Conread position: 21-336
Cow position: chrX:26441192-26440859 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 151

Conread position: 21-336
Cow position: chrX:29849043-29848709 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 153

Conread position: 21-336
Cow position: chrX:35240452-35240786 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 153

Conread position: 21-336
Cow position: chrX:38439064-38439397 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 107

Conread position: 21-336
Cow position: chrX:42462160-42461825 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 153

Conread position: 21-337
Cow position: chrX:1576675-1576338 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:1976009-1975672 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:2160353-2160690 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 162

Conread position: 21-337
Cow position: chrX:2417896-2417559 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:2664597-2664934 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:3078999-3078663 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:3157206-3157543 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:3387694-3388031 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:4343337-4343674 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:4622366-4622029 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:5123771-5123436 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 151

Conread position: 21-337
Cow position: chrX:5306187-5306524 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:5599390-5599053 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:5646516-5646179 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:6196166-6195829 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:6652484-6652147 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:7311581-7311918 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:9011915-9012252 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:9018715-9018378 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:10528186-10527850 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:10922983-10922646 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:11145750-11145413 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 152

Conread position: 21-337
Cow position: chrX:11358477-11358140 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 152

Conread position: 21-337
Cow position: chrX:11663766-11664103 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:11672369-11672706 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:12001559-12001222 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:13384995-13385332 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:13396663-13396327 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 11

Conread position: 21-337
Cow position: chrX:14134063-14134400 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:15260031-15259694 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:15346381-15346044 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:15531564-15531230 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 140

Conread position: 21-337
Cow position: chrX:15781169-15781506 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:16074176-16074501 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 141

Conread position: 21-337
Cow position: chrX:16279237-16279574 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 21-337
Cow position: chrX:16285799-16286134 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:16478503-16478827 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 77

Conread position: 21-337
Cow position: chrX:17783087-17783424 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:17980183-17980520 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:17995047-17995384 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:18462387-18462050 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:18656217-18655880 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:19022721-19022384 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:19109453-19109116 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:19473572-19473235 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 29

Conread position: 21-337
Cow position: chrX:19495372-19495035 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:19774892-19774555 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:20032243-20031910 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:20098910-20099247 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:20742574-20742911 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:22077915-22078252 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 299

Conread position: 21-337
Cow position: chrX:22557089-22557426 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:22609004-22608667 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:22888246-22888584 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 152

Conread position: 21-337
Cow position: chrX:23047368-23047703 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:23109350-23109684 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 159

Conread position: 21-337
Cow position: chrX:23986836-23987169 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 102

Conread position: 21-337
Cow position: chrX:24509455-24509792 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:24809382-24809046 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:25276911-25276574 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:25289091-25288754 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:26974498-26974835 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:27422693-27422357 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:27626943-27627280 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:27759295-27759632 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:28058207-28057870 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:28555847-28555510 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:29760287-29760624 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 152

Conread position: 21-337
Cow position: chrX:30752362-30752699 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:30965689-30966026 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:31605272-31605609 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:31814301-31813964 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:32010619-32010956 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:32039254-32038918 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 20

Conread position: 21-337
Cow position: chrX:33763932-33764269 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:34285476-34285138 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 21-337
Cow position: chrX:36729972-36730311 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:37061203-37060866 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:37764609-37764272 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:37772846-37772508 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 153

Conread position: 21-337
Cow position: chrX:37958085-37958422 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:38230679-38230342 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:38442550-38442887 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:41488577-41488240 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:42120891-42121228 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:42591313-42591650 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 21-337
Cow position: chrX:44168722-44168384 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 154

Conread position: 21-337
Cow position: chrX:45903766-45904103 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 153

Conread position: 21-337
Cow position: chrX:47317994-47318331 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 153

Conread position: 21-338
Cow position: chrX:11581525-11581862 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 150

Conread position: 21-338
Cow position: chrX:39546391-39546052 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 159

Conread position: 21-339
Cow position: chrX:27442964-27442633 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 153

Conread position: 21-339
Cow position: chrX:31261049-31260704 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 159

Conread position: 21-341
Cow position: chrX:7277520-7277842 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 28

Conread position: 21-343
Cow position: chrX:24424804-24424460 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 138

Conread position: 21-345
Cow position: chrX:5408643-5408986 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 153

Conread position: 22-299
Cow position: chrX:24320683-24320393 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 152

Conread position: 22-329
Cow position: chrX:25302151-25301839 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 144

Conread position: 22-329
Cow position: chrX:27997239-27997562 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 152

Conread position: 22-332
Cow position: chrX:24193704-24194023 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 89

Conread position: 22-337
Cow position: chrX:3361410-3361743 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 22-337
Cow position: chrX:10932261-10932597 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 142

Conread position: 22-337
Cow position: chrX:46579266-46578930 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 152

Conread position: 23-327
Cow position: chrX:20888054-20887736 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 151

Conread position: 23-329
Cow position: chrX:1810569-1810252 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 149

Conread position: 23-329
Cow position: chrX:48224598-48224273 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 23-332
Cow position: chrX:25337783-25338098 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 148, 58

Conread position: 23-333
Cow position: chrX:5289097-5288766 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 151

Conread position: 23-334
Cow position: chrX:35223892-35224213 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 151

Conread position: 23-334
Cow position: chrX:48370685-48371017 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 152

Conread position: 23-336
Cow position: chrX:10412382-10412066 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 23-336
Cow position: chrX:29049565-29049883 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 151

Conread position: 23-336
Cow position: chrX:35609576-35609908 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 151

Conread position: 23-336
Cow position: chrX:41122661-41122987 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 150

Conread position: 23-337
Cow position: chrX:13971637-13971302 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 23-337
Cow position: chrX:14458577-14458248 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 151

Conread position: 23-337
Cow position: chrX:23139903-23140234 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 157

Conread position: 23-337
Cow position: chrX:39560062-39559728 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 150

Conread position: 23-338
Cow position: chrX:41192279-41192607 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 144

Conread position: 23-345
Cow position: chrX:18695336-18694993 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 155

Conread position: 24-336
Cow position: chrX:24105218-24105547 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 149

Conread position: 27-337
Cow position: chrX:12776392-12776062 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 147

Conread position: 28-329
Cow position: chrX:18990191-18989884 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 7

Conread position: 28-337
Cow position: chrX:15439054-15438728 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 146

Conread position: 28-337
Cow position: chrX:15504886-15505216 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 146

Conread position: 29-329
Cow position: chrX:38151284-38151605 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 145

Conread position: 29-336
Cow position: chrX:22821010-22821338 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 145

Conread position: 30-284
Cow position: chrX:24292074-24291814 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 131

Conread position: 30-326
Cow position: chrX:27446288-27446599 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 135

Conread position: 30-329
Cow position: chrX:15590275-15589959 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 144

Conread position: 30-329
Cow position: chrX:21227071-21227385 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 142

Conread position: 30-329
Cow position: chrX:32144566-32144253 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 142

Conread position: 30-336
Cow position: chrX:22493604-22493931 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 144

Conread position: 30-336
Cow position: chrX:23280604-23280927 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 143

Conread position: 30-336
Cow position: chrX:32094853-32094526 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 144

Conread position: 30-336
Cow position: chrX:35388310-35387983 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 146

Conread position: 31-315
Cow position: chrX:41433820-41433525 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 19

Conread position: 31-333
Cow position: chrX:34990658-34990951 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 65

Conread position: 31-334
Cow position: chrX:6543854-6544173 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 144

Conread position: 31-334
Cow position: chrX:35272965-35273273 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 60

Conread position: 31-338
Cow position: chrX:42508046-42507725 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 29

Conread position: 32-272
Cow position: chrX:47379868-47379611 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 32-329
Cow position: chrX:22115682-22115370 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 27

Conread position: 32-336
Cow position: chrX:1550549-1550874 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 142

Conread position: 32-337
Cow position: chrX:24447400-24447726 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 142

Conread position: 32-339
Cow position: chrX:23583157-23583485 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 34-334
Cow position: chrX:45430418-45430099 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 284

Conread position: 41-334
Cow position: chrX:37072014-37072325 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 134

Conread position: 42-336
Cow position: chrX:34401607-34401917 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 112

Conread position: 48-334
Cow position: chrX:34192296-34192590 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 125

Conread position: 52-337
Cow position: chrX:29356218-29356512 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 190
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 110

Conread position: 77-327
Cow position: chrX:28157143-28157405 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 42

Conread position: 87-337
Cow position: chrX:12850800-12851057 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 72

Conread position: 89-329
Cow position: chrX:48248493-48248737 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 71

Conread position: 91-245
Cow position: chrX:5118811-5118656 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 70

Conread position: 91-300
Cow position: chrX:32747330-32747544 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 69

Conread position: 91-321
Cow position: chrX:12810792-12811023 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 59

Conread position: 91-326
Cow position: chrX:14134853-14135094 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 59

Conread position: 91-329
Cow position: chrX:11674730-11674977 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 69

Conread position: 91-329
Cow position: chrX:30950200-30950444 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 69

Conread position: 91-329
Cow position: chrX:33803343-33803097 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 40

Conread position: 91-329
Cow position: chrX:34761738-34761982 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 91-329
Cow position: chrX:47967272-47967510 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 69

Conread position: 91-332
Cow position: chrX:17964843-17964604 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 69

Conread position: 91-332
Cow position: chrX:25232258-25232505 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 69

Conread position: 91-332
Cow position: chrX:31436152-31436393 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 69

Conread position: 91-333
Cow position: chrX:13177785-13177549 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 58

Conread position: 91-333
Cow position: chrX:30863527-30863278 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-334
Cow position: chrX:33855568-33855316 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 44

Conread position: 91-334
Cow position: chrX:34009422-34009666 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 69

Conread position: 91-334
Cow position: chrX:34502595-34502839 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 211, 67

Conread position: 91-334
Cow position: chrX:38007096-38006847 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 18

Conread position: 91-334
Cow position: chrX:40558004-40557764 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 183

Conread position: 91-335
Cow position: chrX:5017734-5017496 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 68

Conread position: 91-335
Cow position: chrX:7806050-7806300 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 77, 68

Conread position: 91-336
Cow position: chrX:29877509-29877257 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-336
Cow position: chrX:31443148-31442902 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 46

Conread position: 91-336
Cow position: chrX:38218390-38218629 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 69

Conread position: 91-337
Cow position: chrX:2274589-2274842 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:5112884-5112631 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:5739541-5739288 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:8591212-8591470 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:9085661-9085408 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:10428212-10428464 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 59

Conread position: 91-337
Cow position: chrX:10495905-10496158 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:11860570-11860317 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:12347550-12347803 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:16465972-16466226 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 91-337
Cow position: chrX:20617125-20616872 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:23235502-23235755 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:23452926-23452673 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:24966941-24967194 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:30538480-30538227 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:30899716-30899462 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 70

Conread position: 91-337
Cow position: chrX:34095233-34095486 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:34333528-34333275 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:35803486-35803739 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:36240067-36240320 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:36479604-36479857 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:36820560-36820307 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:39731185-39731438 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:43767865-43767612 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:47608086-47608339 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 69

Conread position: 91-337
Cow position: chrX:48328715-48328462 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 69

Conread position: 91-339
Cow position: chrX:1616379-1616122 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 69

Conread position: 91-340
Cow position: chrX:44980365-44980110 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 59

Conread position: 91-343
Cow position: chrX:3161344-3161085 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 207

Conread position: 91-348
Cow position: chrX:38936371-38936630 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 70

Conread position: 92-333
Cow position: chrX:29083798-29084041 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 209, 64

Conread position: 92-334
Cow position: chrX:7645931-7646173 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 68

Conread position: 92-334
Cow position: chrX:11806343-11806096 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 42

Conread position: 92-336
Cow position: chrX:41743586-41743831 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 66

Conread position: 92-337
Cow position: chrX:2499667-2499418 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 77

Conread position: 92-337
Cow position: chrX:7509810-7510061 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 68

Conread position: 92-337
Cow position: chrX:14409714-14409462 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 68

Conread position: 92-337
Cow position: chrX:37497774-37497522 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 68

Conread position: 92-337
Cow position: chrX:43979291-43979545 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 68

Conread position: 92-337
Cow position: chrX:48165196-48165448 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 68

Conread position: 93-329
Cow position: chrX:47343966-47344207 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 71

Conread position: 93-336
Cow position: chrX:15545571-15545813 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 67

Conread position: 93-337
Cow position: chrX:15008758-15008507 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 67

Conread position: 93-337
Cow position: chrX:29844802-29844551 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 60, 67

Conread position: 93-358
Cow position: chrX:29777716-29777987 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 67

Conread position: 94-336
Cow position: chrX:11718105-11717865 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 64

Conread position: 94-339
Cow position: chrX:35937394-35937158 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 66

Conread position: 97-337
Cow position: chrX:27469976-27469729 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 63

Conread position: 105-329
Cow position: chrX:19188622-19188849 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 55

Conread position: 135-329
Cow position: chrX:37836305-37836500 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 25

Conread position: 167-336
Cow position: chrX:45693856-45694025 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 165

Conread position: 168-329
Cow position: chrX:45787405-45787563 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 118

Conread position: 176-336
Cow position: chrX:27680162-27680318 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 178-334
Cow position: chrX:9416932-9416776 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 93

Conread position: 178-336
Cow position: chrX:30833077-30832928 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 178-339
Cow position: chrX:26876120-26875961 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 50

Conread position: 183-336
Cow position: chrX:9635415-9635262 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 89

Conread position: 184-336
Cow position: chrX:42339169-42339023 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 102

Conread position: 185-336
Cow position: chrX:619240-619085 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 185-336
Cow position: chrX:2383257-2383408 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 185-362
Cow position: chrX:19930424-19930600 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 86

Conread position: 188-334
Cow position: chrX:13265849-13265706 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 99

Conread position: 196-338
Cow position: chrX:23091660-23091802 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 104

Conread position: 200-338
Cow position: chrX:2186041-2186181 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 201-336
Cow position: chrX:47249000-47248865 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 98

Conread position: 226-336
Cow position: chrX:31311835-31311948 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.