Cow genome map

Conread name: reye1621b_i18.y1

Conread position: 4-303
Cow position: chr10:31465528-31465809 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 4-350
Cow position: chr10:24974411-24974087 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 257, 81

Conread position: 4-352
Cow position: chr10:20373185-20372863 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 256, 107

Conread position: 4-352
Cow position: chr10:24297257-24296907 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 247

Conread position: 50-347
Cow position: chr10:51837202-51836917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 211, 90

Conread position: 144-352
Cow position: chr10:39940278-39940078 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 117, 37

Conread position: 152-350
Cow position: chr10:10860182-10859982 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 81

Conread position: 182-352
Cow position: chr10:23877551-23877374 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 188-335
Cow position: chr10:39775191-39775044 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 23

Conread position: 188-352
Cow position: chr10:63045991-63046156 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 45

Conread position: 192-352
Cow position: chr10:21449795-21449634 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 91

Conread position: 209-352
Cow position: chr10:24751331-24751475 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 21

Conread position: 210-352
Cow position: chr10:19843090-19843237 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr10:22104899-22105046 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr10:37773298-37773445 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr10:57553722-57553575 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 211-352
Cow position: chr10:2516457-2516599 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 23

Conread position: 211-352
Cow position: chr10:44866296-44866440 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 9

Conread position: 211-352
Cow position: chr10:53158000-53157857 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 19

Conread position: 212-344
Cow position: chr10:29106401-29106268 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 18

Conread position: 213-350
Cow position: chr10:10173323-10173466 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 213-352
Cow position: chr10:2736436-2736581 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 213-352
Cow position: chr10:8693469-8693324 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:14807358-14807502 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 123

Conread position: 213-352
Cow position: chr10:26601400-26601545 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:29174645-29174790 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:32581885-32582030 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:38397336-38397192 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 132

Conread position: 213-352
Cow position: chr10:39648774-39648629 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:44440528-44440385 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 213-352
Cow position: chr10:47084447-47084592 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr10:51776279-51776134 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 215-350
Cow position: chr10:37041418-37041559 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 215-352
Cow position: chr10:48170952-48171096 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 215-352
Cow position: chr10:48384802-48384667 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 216-352
Cow position: chr10:8459647-8459789 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 216-352
Cow position: chr10:31527126-31527263 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 18

Conread position: 217-352
Cow position: chr10:28235928-28236067 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 220-342
Cow position: chr10:10023395-10023521 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 220-352
Cow position: chr10:44785718-44785854 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 220-352
Cow position: chr10:49432539-49432675 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 222-352
Cow position: chr10:38273549-38273683 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 223-351
Cow position: chr10:14904644-14904776 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 225-344
Cow position: chr10:53081372-53081493 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 89

Conread position: 226-340
Cow position: chr10:34664342-34664224 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 226-349
Cow position: chr10:33664951-33665077 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 50

Conread position: 226-349
Cow position: chr10:50110772-50110642 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 226-350
Cow position: chr10:3506710-3506584 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 110

Conread position: 226-352
Cow position: chr10:9799082-9798952 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 226-352
Cow position: chr10:10082646-10082516 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr10:11103911-11103781 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr10:14964132-14964002 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr10:42636114-42636245 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr10:43288946-43288815 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr10:43489063-43489193 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr10:44203264-44203133 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr10:46226255-46226385 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr10:52826193-52826063 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr10:53828017-53828148 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 74

Conread position: 230-352
Cow position: chr10:63954936-63955061 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 233-350
Cow position: chr10:21490381-21490498 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 233-352
Cow position: chr10:130364-130486 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:325318-325196 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:326533-326655 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:9517063-9517185 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:9681729-9681607 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:15753803-15753922 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 233-352
Cow position: chr10:26292044-26291922 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:26922845-26922723 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:30720139-30720261 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:32282458-32282580 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:32704206-32704328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:47910059-47910181 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:51558844-51558966 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:62405352-62405230 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr10:63776272-63776394 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 235-352
Cow position: chr10:23648847-23648727 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 235-352
Cow position: chr10:28030490-28030370 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 236-352
Cow position: chr10:2117002-2116883 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.