Cow genome map
Conread name: | reye1621b_i18.y1 |
Conread position: | 5-309 |
Cow position: | chr11:8266700-8267003 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 174 |
Conread position: | 6-352 |
Cow position: | chr11:41177805-41178156 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 128 |
Conread position: | 23-352 |
Cow position: | chr11:40133920-40133596 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 158 |
Conread position: | 128-352 |
Cow position: | chr11:10214530-10214316 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 187-350 |
Cow position: | chr11:14650197-14650034 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 74, 7 |
Conread position: | 188-346 |
Cow position: | chr11:37345982-37346141 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 73, 23 |
Conread position: | 193-352 |
Cow position: | chr11:32068212-32068052 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 68, 14 |
Conread position: | 196-352 |
Cow position: | chr11:44488041-44488204 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 20, 100 |
Conread position: | 200-352 |
Cow position: | chr11:34842103-34841944 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 208-352 |
Cow position: | chr11:25336197-25336342 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 53, 22 |
Conread position: | 209-352 |
Cow position: | chr11:9153843-9153703 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 210-352 |
Cow position: | chr11:8366617-8366764 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:15495445-15495592 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:23904339-23904486 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:25759800-25759946 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:26592720-26592573 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:47972795-47972648 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:52846532-52846679 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:57625133-57624986 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:62009744-62009597 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr11:74990677-74990824 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 211-352 |
Cow position: | chr11:77746145-77746002 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 52, 19 |
Conread position: | 212-346 |
Cow position: | chr11:8499125-8499265 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 39 |
Conread position: | 212-350 |
Cow position: | chr11:45632895-45632754 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 213-351 |
Cow position: | chr11:1268446-1268302 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:10043303-10043448 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 213-352 |
Cow position: | chr11:10100107-10100252 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:10698687-10698542 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:34638445-34638300 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:40139511-40139367 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 213-352 |
Cow position: | chr11:41314354-41314499 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:43510916-43510771 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:51034335-51034480 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:67920279-67920138 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 213-352 |
Cow position: | chr11:75256249-75256394 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr11:83001088-83001233 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 215-347 |
Cow position: | chr11:9432440-9432573 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 46, 15 |
Conread position: | 216-344 |
Cow position: | chr11:11592043-11592176 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 216-344 |
Cow position: | chr11:47757925-47757792 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 216-352 |
Cow position: | chr11:4267092-4266951 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 216-352 |
Cow position: | chr11:36930471-36930330 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 216-352 |
Cow position: | chr11:40773007-40772866 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 217-340 |
Cow position: | chr11:71271966-71271840 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 218-352 |
Cow position: | chr11:71078489-71078629 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 220-352 |
Cow position: | chr11:38505163-38505027 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 220-352 |
Cow position: | chr11:40402703-40402570 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 13, 27 |
Conread position: | 226-340 |
Cow position: | chr11:21853177-21853059 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 99 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-346 |
Cow position: | chr11:53772747-53772865 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 40 |
Conread position: | 226-349 |
Cow position: | chr11:8246257-8246384 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-350 |
Cow position: | chr11:9388411-9388539 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-350 |
Cow position: | chr11:56228003-56228130 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 117 |
Conread position: | 226-352 |
Cow position: | chr11:7719441-7719311 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr11:23883421-23883551 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr11:31236329-31236199 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr11:31836258-31836388 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr11:52127915-52127786 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 15 |
Conread position: | 226-352 |
Cow position: | chr11:67848898-67848768 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 110 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr11:70602209-70602079 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr11:72313665-72313795 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr11:73513298-73513166 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 226-352 |
Cow position: | chr11:77034018-77033888 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr11:85390788-85390658 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 227-352 |
Cow position: | chr11:4024279-4024151 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 233-348 |
Cow position: | chr11:41167612-41167494 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:2285795-2285917 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:5273492-5273370 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 233-352 |
Cow position: | chr11:5482364-5482242 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:7229442-7229564 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 233-352 |
Cow position: | chr11:12353810-12353688 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 233-352 |
Cow position: | chr11:17854176-17854298 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:18920515-18920394 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 28, 58 |
Conread position: | 233-352 |
Cow position: | chr11:19060992-19060870 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:19099403-19099281 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 233-352 |
Cow position: | chr11:26121838-26121716 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:27724819-27724697 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 233-352 |
Cow position: | chr11:30200617-30200495 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:30700576-30700698 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:32077701-32077579 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:33601557-33601435 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:35738262-35738140 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 233-352 |
Cow position: | chr11:58139776-58139898 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:62791977-62792098 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 233-352 |
Cow position: | chr11:65282092-65282214 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr11:67295925-67295803 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 235-352 |
Cow position: | chr11:13087583-13087463 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 94 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 235-352 |
Cow position: | chr11:41024903-41025020 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 236-352 |
Cow position: | chr11:46780985-46780866 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.