Cow genome map
| Conread name: | reye1621b_i18.y1 |
| Conread position: | 79-344 |
| Cow position: | chr18:44229913-44229649 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 181, 120 |
| Conread position: | 188-352 |
| Cow position: | chr18:30844483-30844318 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 188-352 |
| Cow position: | chr18:40195535-40195699 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 194-344 |
| Cow position: | chr18:42746648-42746803 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 203-352 |
| Cow position: | chr18:27800445-27800293 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 204-352 |
| Cow position: | chr18:41237965-41238119 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 210-352 |
| Cow position: | chr18:11869928-11870075 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr18:15911559-15911705 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 210-352 |
| Cow position: | chr18:23688613-23688760 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr18:29079178-29079325 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr18:29586171-29586024 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 211-352 |
| Cow position: | chr18:36336611-36336469 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 212-350 |
| Cow position: | chr18:18215571-18215427 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 212-352 |
| Cow position: | chr18:16857227-16857373 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 212-352 |
| Cow position: | chr18:32122236-32122095 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 213-347 |
| Cow position: | chr18:16226668-16226805 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 213-351 |
| Cow position: | chr18:26243015-26242872 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 213-352 |
| Cow position: | chr18:603021-602876 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr18:24619866-24620011 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr18:51580342-51580197 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr18:55554694-55554839 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 215-350 |
| Cow position: | chr18:14419422-14419563 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 215-352 |
| Cow position: | chr18:27990202-27990345 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 216-352 |
| Cow position: | chr18:42425026-42425161 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 220-352 |
| Cow position: | chr18:17943964-17944098 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 223-352 |
| Cow position: | chr18:37692829-37692697 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 226-349 |
| Cow position: | chr18:8965751-8965875 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 226-352 |
| Cow position: | chr18:36776734-36776864 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr18:40484457-40484587 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr18:45978834-45978964 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 227-352 |
| Cow position: | chr18:45980955-45981083 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 229-352 |
| Cow position: | chr18:6733503-6733378 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 230-352 |
| Cow position: | chr18:7953107-7953234 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 233-350 |
| Cow position: | chr18:41837624-41837504 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-350 |
| Cow position: | chr18:54033174-54033294 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-351 |
| Cow position: | chr18:16173147-16173026 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:5536439-5536561 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:14127820-14127699 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:23701337-23701215 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:24037380-24037258 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:27833960-27833838 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:28968823-28968701 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:37509428-37509550 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:51485053-51485175 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 233-352 |
| Cow position: | chr18:52656260-52656382 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 235-350 |
| Cow position: | chr18:23802491-23802609 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.