Cow genome map

Conread name: reye1621b_i18.y1

Conread position: 4-352
Cow position: chr2:10468315-10468664 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 140

Conread position: 4-352
Cow position: chr2:33251912-33251582 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 256, 98

Conread position: 11-346
Cow position: chr2:16497426-16497086 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 53

Conread position: 134-345
Cow position: chr2:23271861-23271662 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 181-344
Cow position: chr2:61136054-61136222 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 12

Conread position: 188-340
Cow position: chr2:18242886-18243039 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 42

Conread position: 188-341
Cow position: chr2:85739232-85739386 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 42

Conread position: 188-350
Cow position: chr2:16718030-16717867 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 44

Conread position: 188-352
Cow position: chr2:826080-825915 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 44

Conread position: 193-352
Cow position: chr2:4180245-4180079 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 195-344
Cow position: chr2:14348875-14349029 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 207-352
Cow position: chr2:6944937-6945087 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 208-352
Cow position: chr2:24876313-24876165 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 210-352
Cow position: chr2:12694782-12694634 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:23995134-23994987 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:31272810-31272663 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 210-352
Cow position: chr2:38335266-38335413 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:39107146-39107289 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 83

Conread position: 210-352
Cow position: chr2:50080456-50080603 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:53204236-53204088 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:57938286-57938433 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:62735060-62735207 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:68422443-68422590 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:72535176-72535323 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 210-352
Cow position: chr2:84101779-84101632 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 211-352
Cow position: chr2:16313678-16313823 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 9

Conread position: 211-352
Cow position: chr2:52128439-52128296 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 9

Conread position: 212-341
Cow position: chr2:4417165-4417035 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 18

Conread position: 212-342
Cow position: chr2:36047422-36047290 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 23

Conread position: 212-352
Cow position: chr2:72931196-72931051 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 213-351
Cow position: chr2:39675864-39675719 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:2208774-2208629 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:2212598-2212453 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:5116831-5116976 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:17265540-17265397 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:24423136-24422991 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:41045974-41045829 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:44094258-44094403 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:48716620-48716765 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:53182823-53182679 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:54148180-54148325 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 213-352
Cow position: chr2:55164413-55164268 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:60051576-60051431 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:62731417-62731562 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 213-352
Cow position: chr2:63707257-63707112 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 214-352
Cow position: chr2:38260309-38260161 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 215-346
Cow position: chr2:77281073-77281210 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 215-352
Cow position: chr2:8121593-8121736 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 215-352
Cow position: chr2:27357958-27358101 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 215-352
Cow position: chr2:28611944-28611806 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 71

Conread position: 215-352
Cow position: chr2:68191454-68191314 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 15

Conread position: 216-340
Cow position: chr2:32659340-32659469 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 216-340
Cow position: chr2:50565214-50565339 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 14

Conread position: 216-350
Cow position: chr2:25024007-25024146 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 216-352
Cow position: chr2:76314902-76314766 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 218-352
Cow position: chr2:30909399-30909536 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 219-347
Cow position: chr2:21169241-21169374 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 219-352
Cow position: chr2:30959035-30959172 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 221-352
Cow position: chr2:16752996-16752859 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 222-352
Cow position: chr2:70915856-70915991 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 224-352
Cow position: chr2:12442865-12442997 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 225-352
Cow position: chr2:50980259-50980131 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 54

Conread position: 226-328
Cow position: chr2:86349196-86349302 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 226-341
Cow position: chr2:31124923-31125042 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 226-344
Cow position: chr2:39661912-39661790 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 226-351
Cow position: chr2:12935336-12935207 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 226-351
Cow position: chr2:67743800-67743929 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:15963640-15963510 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:22080811-22080941 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:25590346-25590216 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr2:41157086-41157216 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:45917864-45917732 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:52621683-52621813 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 226-352
Cow position: chr2:57557786-57557656 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 226-352
Cow position: chr2:76985003-76984875 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 116

Conread position: 227-351
Cow position: chr2:42839169-42839041 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 230-352
Cow position: chr2:383206-383082 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 230-352
Cow position: chr2:44987236-44987112 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 43

Conread position: 233-350
Cow position: chr2:79978175-79978055 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:981916-982038 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:1186940-1186818 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 233-352
Cow position: chr2:9700440-9700562 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:14938586-14938708 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:24928299-24928421 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:25885633-25885512 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 58

Conread position: 233-352
Cow position: chr2:28646710-28646588 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 233-352
Cow position: chr2:31858278-31858156 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:32062821-32062699 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 233-352
Cow position: chr2:44476573-44476451 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 233-352
Cow position: chr2:51921651-51921526 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 233-352
Cow position: chr2:56306914-56306793 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 72

Conread position: 233-352
Cow position: chr2:56366029-56365908 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 72

Conread position: 233-352
Cow position: chr2:81259823-81259945 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.