Cow genome map
| Conread name: | reye1621b_i18.y1 |
| Conread position: | 4-339 |
| Cow position: | chr22:3303488-3303149 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 151, 41 |
| Conread position: | 9-345 |
| Cow position: | chr22:18194877-18195209 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 36 |
| Conread position: | 80-341 |
| Cow position: | chr22:31871242-31870981 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 125-347 |
| Cow position: | chr22:799123-799354 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 188-352 |
| Cow position: | chr22:35668148-35667984 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 196-352 |
| Cow position: | chr22:31306560-31306723 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 198-352 |
| Cow position: | chr22:34749719-34749876 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 200-352 |
| Cow position: | chr22:7304163-7304008 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 210-352 |
| Cow position: | chr22:3275010-3274863 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr22:25241185-25241038 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr22:28714246-28714393 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr22:28996962-28996815 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr22:42807658-42807511 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 212-352 |
| Cow position: | chr22:14807602-14807748 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 213-350 |
| Cow position: | chr22:26089887-26089744 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr22:3488987-3488842 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr22:11643582-11643437 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr22:22607507-22607652 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 215-333 |
| Cow position: | chr22:11806261-11806139 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 215-344 |
| Cow position: | chr22:10330496-10330630 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 215-352 |
| Cow position: | chr22:33951608-33951465 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 216-344 |
| Cow position: | chr22:34901216-34901348 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 216-352 |
| Cow position: | chr22:32811858-32811717 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 219-341 |
| Cow position: | chr22:9277156-9277281 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 219-352 |
| Cow position: | chr22:13721382-13721247 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 220-352 |
| Cow position: | chr22:3807034-3807170 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 220-352 |
| Cow position: | chr22:42500008-42499872 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 222-348 |
| Cow position: | chr22:36208056-36208184 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 226-342 |
| Cow position: | chr22:13696557-13696438 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 226-350 |
| Cow position: | chr22:51874-52002 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-350 |
| Cow position: | chr22:24817399-24817273 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 226-352 |
| Cow position: | chr22:4292004-4292135 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:8417616-8417745 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 226-352 |
| Cow position: | chr22:11838062-11837932 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:21592787-21592917 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:22285359-22285489 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:33093702-33093831 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 226-352 |
| Cow position: | chr22:33448939-33448810 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 226-352 |
| Cow position: | chr22:36188416-36188546 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:37290490-37290360 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr22:38440006-38439878 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 226-352 |
| Cow position: | chr22:41846205-41846075 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 230-352 |
| Cow position: | chr22:1310574-1310449 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 230-352 |
| Cow position: | chr22:19600432-19600307 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 230-352 |
| Cow position: | chr22:34893918-34894043 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 232-352 |
| Cow position: | chr22:9685177-9685300 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 233-347 |
| Cow position: | chr22:34171822-34171939 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-350 |
| Cow position: | chr22:6924403-6924523 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:981694-981816 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:1517669-1517547 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:3433591-3433469 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:3941429-3941551 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:6340024-6340146 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:15308590-15308468 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:22048828-22048706 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:22107415-22107536 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 233-352 |
| Cow position: | chr22:22278464-22278586 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:22563041-22563163 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:29553811-29553690 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:31315915-31316037 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr22:32209984-32210106 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.