Cow genome map
| Conread name: | reye1621b_i18.y1 |
| Conread position: | 4-352 |
| Cow position: | chr4:14142211-14142549 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 190 |
| Conread position: | 47-349 |
| Cow position: | chr4:61651608-61651330 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 214, 12 |
| Conread position: | 193-352 |
| Cow position: | chr4:19237131-19237293 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 208-345 |
| Cow position: | chr4:22074021-22073882 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 209-350 |
| Cow position: | chr4:20243230-20243378 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 210-352 |
| Cow position: | chr4:10122483-10122630 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr4:20656985-20656841 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 211-341 |
| Cow position: | chr4:22237337-22237205 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 211-350 |
| Cow position: | chr4:5610934-5610789 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 211-352 |
| Cow position: | chr4:19957106-19957251 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 213-351 |
| Cow position: | chr4:24139952-24140098 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:1006971-1007116 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:6266137-6265992 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:6457969-6457827 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:9357317-9357462 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:17821609-17821754 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:20616639-20616494 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:26874829-26874684 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:30474458-30474603 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:54810768-54810623 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:59452439-59452294 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 213-352 |
| Cow position: | chr4:60224796-60224651 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 215-352 |
| Cow position: | chr4:23451935-23451802 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 215-352 |
| Cow position: | chr4:57987826-57987967 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 216-352 |
| Cow position: | chr4:23150573-23150435 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 216-352 |
| Cow position: | chr4:48029941-48030082 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 220-352 |
| Cow position: | chr4:32249582-32249718 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 220-352 |
| Cow position: | chr4:43896409-43896273 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 225-352 |
| Cow position: | chr4:39457763-39457893 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 226-335 |
| Cow position: | chr4:1499997-1499884 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-350 |
| Cow position: | chr4:46526168-46526294 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 226-352 |
| Cow position: | chr4:4379467-4379597 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr4:6034933-6034803 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr4:7806262-7806395 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 226-352 |
| Cow position: | chr4:10135108-10134981 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr4:61449607-61449740 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr4:64874933-64874804 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 124 |
| Conread position: | 227-352 |
| Cow position: | chr4:43476696-43476567 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 233-347 |
| Cow position: | chr4:27288005-27287888 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:3449904-3450026 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:5441559-5441437 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:6487266-6487144 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:10884740-10884862 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:16641920-16642042 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:17033399-17033277 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:18813108-18812986 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:23304239-23304117 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:33496661-33496783 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:34712919-34713040 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 233-352 |
| Cow position: | chr4:36026169-36026047 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:38153198-38153076 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:39421697-39421819 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:49744773-49744895 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:54161961-54161839 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr4:61242381-61242503 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 235-352 |
| Cow position: | chr4:358986-359106 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 236-352 |
| Cow position: | chr4:33069735-33069616 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.