Cow genome map
| Conread name: | reye1621b_i18.y1 |
| Conread position: | 4-352 |
| Cow position: | chr8:6852584-6852929 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 257, 173 |
| Conread position: | 126-337 |
| Cow position: | chr8:42787171-42786970 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 174-350 |
| Cow position: | chr8:10969952-10970125 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 188-340 |
| Cow position: | chr8:22030688-22030841 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 188-352 |
| Cow position: | chr8:14588298-14588134 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 188-352 |
| Cow position: | chr8:42116925-42117089 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 199-344 |
| Cow position: | chr8:40889049-40888901 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 206-351 |
| Cow position: | chr8:28230331-28230185 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 206-352 |
| Cow position: | chr8:8514486-8514339 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 206-352 |
| Cow position: | chr8:47751552-47751405 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 207-352 |
| Cow position: | chr8:12452669-12452818 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:2166933-2166786 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:6588442-6588295 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:25534721-25534866 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 210-352 |
| Cow position: | chr8:34253130-34253277 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:35291636-35291489 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:46961611-46961758 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:50430551-50430404 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 210-352 |
| Cow position: | chr8:53428982-53429131 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 211-352 |
| Cow position: | chr8:8097834-8097692 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 211-352 |
| Cow position: | chr8:13322585-13322440 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 211-352 |
| Cow position: | chr8:50927508-50927366 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 212-352 |
| Cow position: | chr8:12794986-12795126 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 212-352 |
| Cow position: | chr8:53450643-53450784 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 213-352 |
| Cow position: | chr8:6464555-6464410 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:8381992-8382137 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:8667231-8667086 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:19301824-19301966 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:22531632-22531487 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:31976813-31976667 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:32607790-32607645 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:41659218-41659073 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:42317675-42317530 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:55270934-55270789 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 213-352 |
| Cow position: | chr8:60064690-60064835 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 220-352 |
| Cow position: | chr8:581084-580948 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 220-352 |
| Cow position: | chr8:21789226-21789090 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 222-352 |
| Cow position: | chr8:11136525-11136395 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-352 |
| Cow position: | chr8:46624886-46624753 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 224-343 |
| Cow position: | chr8:48766902-48767024 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 225-350 |
| Cow position: | chr8:33585347-33585474 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 226-340 |
| Cow position: | chr8:27658460-27658573 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 226-350 |
| Cow position: | chr8:47466769-47466641 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-351 |
| Cow position: | chr8:3788029-3788158 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:8227798-8227668 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:10739967-10739837 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:11118348-11118219 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:23651334-23651204 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:27152818-27152689 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:42009551-42009681 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:58034747-58034617 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-352 |
| Cow position: | chr8:61197662-61197532 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 227-352 |
| Cow position: | chr8:43902774-43902903 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 230-352 |
| Cow position: | chr8:39321825-39321700 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:3956795-3956917 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:4690017-4690139 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:14258691-14258813 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:22376572-22376450 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:24912429-24912307 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:25671908-25672030 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:33591979-33592101 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:36333032-36332910 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:36632832-36632710 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:38394062-38394184 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:39192293-39192171 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:47065986-47065864 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:47463152-47463274 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:49220797-49220919 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:49284456-49284334 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:49620055-49620177 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 233-352 |
| Cow position: | chr8:60769786-60769664 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.