Cow genome map
Conread name: | reye1621b_i18.y1 |
Conread position: | 4-344 |
Cow position: | chr9:825853-825523 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 137 |
Conread position: | 4-350 |
Cow position: | chr9:4191353-4191707 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 5-352 |
Cow position: | chr9:27898079-27898420 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 152 |
Conread position: | 6-347 |
Cow position: | chr9:52408256-52407936 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 248 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 31, 60 |
Conread position: | 125-335 |
Cow position: | chr9:47545805-47546027 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 69, 164 |
Conread position: | 188-347 |
Cow position: | chr9:25959451-25959286 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 193-350 |
Cow position: | chr9:29184221-29184380 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 19 |
Conread position: | 193-352 |
Cow position: | chr9:2681720-2681880 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 68, 39 |
Conread position: | 196-352 |
Cow position: | chr9:54413382-54413218 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 203-352 |
Cow position: | chr9:10567122-10566969 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 210-352 |
Cow position: | chr9:2873720-2873867 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr9:3061832-3061979 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr9:10634159-10634307 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 210-352 |
Cow position: | chr9:12378693-12378837 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr9:28785588-28785734 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 210-352 |
Cow position: | chr9:34238514-34238367 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 210-352 |
Cow position: | chr9:44202835-44202688 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 211-352 |
Cow position: | chr9:17633736-17633879 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 50, 19 |
Conread position: | 211-352 |
Cow position: | chr9:21841335-21841192 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 211-352 |
Cow position: | chr9:28025068-28025212 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 212-347 |
Cow position: | chr9:30737265-30737129 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 20 |
Conread position: | 212-350 |
Cow position: | chr9:12161846-12161986 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 77 |
Conread position: | 212-352 |
Cow position: | chr9:4553047-4553185 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 49, 22 |
Conread position: | 213-350 |
Cow position: | chr9:45975089-45974946 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:1740312-1740168 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 98 |
Conread position: | 213-352 |
Cow position: | chr9:1838198-1838342 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 213-352 |
Cow position: | chr9:3058378-3058233 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 213-352 |
Cow position: | chr9:10802920-10803064 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:26325993-26326137 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 213-352 |
Cow position: | chr9:37174158-37174013 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:37908094-37908239 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:49221020-49220875 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:59454650-59454505 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 213-352 |
Cow position: | chr9:64011982-64011837 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 215-352 |
Cow position: | chr9:17302729-17302588 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 215-352 |
Cow position: | chr9:30675323-30675466 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 219-352 |
Cow position: | chr9:3311543-3311680 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 220-352 |
Cow position: | chr9:28657801-28657665 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 220-352 |
Cow position: | chr9:47996151-47996015 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 220-352 |
Cow position: | chr9:58674652-58674517 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 14, 34 |
Conread position: | 222-352 |
Cow position: | chr9:199569-199435 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 225-347 |
Cow position: | chr9:3806856-3806981 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 226-337 |
Cow position: | chr9:13220799-13220915 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-347 |
Cow position: | chr9:9442712-9442837 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 226-350 |
Cow position: | chr9:16178846-16178974 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr9:2200853-2200983 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr9:5414789-5414659 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr9:6365638-6365768 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr9:14045927-14046057 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 226-352 |
Cow position: | chr9:33999494-33999626 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr9:42868610-42868480 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 226-352 |
Cow position: | chr9:59479595-59479465 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 230-352 |
Cow position: | chr9:2548428-2548306 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 230-352 |
Cow position: | chr9:3756572-3756447 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 230-352 |
Cow position: | chr9:12195190-12195065 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 230-352 |
Cow position: | chr9:49981763-49981888 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 233-352 |
Cow position: | chr9:1991284-1991162 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:2618515-2618393 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 233-352 |
Cow position: | chr9:6252834-6252956 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:6764499-6764377 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:9016344-9016466 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:17018024-17018146 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:22656068-22656190 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:27781642-27781520 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:29106145-29106267 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 233-352 |
Cow position: | chr9:31810847-31810969 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:32972636-32972758 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:37158342-37158220 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:38634049-38634171 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:42570485-42570607 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 233-352 |
Cow position: | chr9:43302331-43302212 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 235-350 |
Cow position: | chr9:19156020-19155902 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 235-352 |
Cow position: | chr9:24918016-24917896 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.