Cow genome map
| Conread name: | reye1630b_c2r1.y1 |
| Conread position: | 89-375 |
| Cow position: | chr21:26735789-26735499 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 183-374 |
| Cow position: | chr21:13417958-13418139 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 183-383 |
| Cow position: | chr21:6696738-6696932 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 184-383 |
| Cow position: | chr21:31582167-31582366 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 186-383 |
| Cow position: | chr21:46607315-46607504 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 187-369 |
| Cow position: | chr21:8358934-8359125 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 191-383 |
| Cow position: | chr21:17184208-17184003 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 194-369 |
| Cow position: | chr21:18495506-18495321 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 141 |
| Conread position: | 199-382 |
| Cow position: | chr21:42189476-42189670 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 201-369 |
| Cow position: | chr21:27229524-27229694 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 202-380 |
| Cow position: | chr21:25012356-25012171 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 203-390 |
| Cow position: | chr21:6998222-6998026 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 204-382 |
| Cow position: | chr21:31279531-31279343 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 204-383 |
| Cow position: | chr21:6945638-6945461 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 204-390 |
| Cow position: | chr21:641862-641666 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 206-378 |
| Cow position: | chr21:30658137-30657961 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 206-381 |
| Cow position: | chr21:957943-957760 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 206-382 |
| Cow position: | chr21:12298863-12298681 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 206-390 |
| Cow position: | chr21:4400069-4399882 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 208-375 |
| Cow position: | chr21:45970905-45971080 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 209-381 |
| Cow position: | chr21:43642790-43642626 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 209-382 |
| Cow position: | chr21:8523905-8523728 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 209-385 |
| Cow position: | chr21:37837805-37837982 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 210-379 |
| Cow position: | chr21:2785229-2785403 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 210-381 |
| Cow position: | chr21:26147331-26147165 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 210-391 |
| Cow position: | chr21:40059289-40059108 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 211-354 |
| Cow position: | chr21:12074909-12075045 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 211-375 |
| Cow position: | chr21:1511558-1511383 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 211-379 |
| Cow position: | chr21:15012702-15012529 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 211-380 |
| Cow position: | chr21:34654341-34654162 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 211-380 |
| Cow position: | chr21:39403256-39403436 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 211-382 |
| Cow position: | chr21:23587144-23586969 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 211-382 |
| Cow position: | chr21:30592043-30592222 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 211-382 |
| Cow position: | chr21:42209374-42209542 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 211-383 |
| Cow position: | chr21:4276352-4276516 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 211-383 |
| Cow position: | chr21:9939939-9940102 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 211-383 |
| Cow position: | chr21:30145362-30145542 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 211-390 |
| Cow position: | chr21:20174584-20174397 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 212-372 |
| Cow position: | chr21:3796674-3796838 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 212-376 |
| Cow position: | chr21:30222610-30222438 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 212-390 |
| Cow position: | chr21:25764886-25764715 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 213-367 |
| Cow position: | chr21:36398302-36398461 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 213-382 |
| Cow position: | chr21:18064657-18064827 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 213-383 |
| Cow position: | chr21:33413829-33414002 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 214-383 |
| Cow position: | chr21:18941584-18941748 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 215-354 |
| Cow position: | chr21:18497732-18497879 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 215-376 |
| Cow position: | chr21:11678055-11678219 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 215-383 |
| Cow position: | chr21:37235630-37235471 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 216-323 |
| Cow position: | chr21:42027644-42027751 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 216-348 |
| Cow position: | chr21:33244616-33244750 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 111 |
| Conread position: | 216-354 |
| Cow position: | chr21:13395847-13395713 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 216-365 |
| Cow position: | chr21:38449186-38449345 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 216-369 |
| Cow position: | chr21:33982548-33982710 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 216-373 |
| Cow position: | chr21:34581431-34581595 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 216-375 |
| Cow position: | chr21:9905596-9905759 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 216-375 |
| Cow position: | chr21:11675806-11675959 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 216-375 |
| Cow position: | chr21:21159069-21158905 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 216-375 |
| Cow position: | chr21:29418839-29418662 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 216-379 |
| Cow position: | chr21:29011710-29011880 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 216-380 |
| Cow position: | chr21:5898143-5898313 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 216-381 |
| Cow position: | chr21:15741837-15741997 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 216-381 |
| Cow position: | chr21:39528756-39528600 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 216-382 |
| Cow position: | chr21:438822-438649 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 216-382 |
| Cow position: | chr21:3254399-3254239 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-382 |
| Cow position: | chr21:5427193-5427027 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 216-383 |
| Cow position: | chr21:6051771-6051589 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-383 |
| Cow position: | chr21:8207023-8206858 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 216-383 |
| Cow position: | chr21:10673376-10673207 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 77, 125 |
| Conread position: | 216-383 |
| Cow position: | chr21:18135622-18135789 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 216-383 |
| Cow position: | chr21:32339479-32339654 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-383 |
| Cow position: | chr21:34648943-34649104 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 216-383 |
| Cow position: | chr21:38901029-38900860 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 216-383 |
| Cow position: | chr21:45356081-45355919 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 216-383 |
| Cow position: | chr21:46241993-46242154 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 216-386 |
| Cow position: | chr21:25014774-25014947 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 71, 117 |
| Conread position: | 216-391 |
| Cow position: | chr21:47715298-47715464 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 217-339 |
| Cow position: | chr21:23348335-23348460 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 217-373 |
| Cow position: | chr21:4099112-4098965 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 217-375 |
| Cow position: | chr21:21907176-21907340 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 217-379 |
| Cow position: | chr21:22851180-22851010 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 217-383 |
| Cow position: | chr21:7768691-7768524 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 218-375 |
| Cow position: | chr21:20413092-20412920 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 218-377 |
| Cow position: | chr21:46848869-46849036 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 218-380 |
| Cow position: | chr21:6851429-6851261 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 218-383 |
| Cow position: | chr21:12301266-12301425 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 218-383 |
| Cow position: | chr21:27521077-27521253 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 218-384 |
| Cow position: | chr21:44220610-44220448 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 88, 66 |
| Conread position: | 218-385 |
| Cow position: | chr21:21940146-21940323 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 219-383 |
| Cow position: | chr21:28244731-28244556 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 219-383 |
| Cow position: | chr21:33727217-33727375 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 66 |
| Conread position: | 219-390 |
| Cow position: | chr21:46972902-46973071 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 219-392 |
| Cow position: | chr21:674931-674762 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 220-379 |
| Cow position: | chr21:14126534-14126367 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 222-369 |
| Cow position: | chr21:15543979-15544129 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 222-373 |
| Cow position: | chr21:19158071-19158221 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 222-375 |
| Cow position: | chr21:31159646-31159492 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 222-379 |
| Cow position: | chr21:1059318-1059164 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 222-381 |
| Cow position: | chr21:49353884-49353724 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 222-383 |
| Cow position: | chr21:22720827-22720660 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 161 |
| Conread position: | 222-383 |
| Cow position: | chr21:29978505-29978674 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 222-383 |
| Cow position: | chr21:30848688-30848855 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 222-383 |
| Cow position: | chr21:34740086-34739930 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 222-390 |
| Cow position: | chr21:36121489-36121306 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 223-375 |
| Cow position: | chr21:23397425-23397572 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 223-378 |
| Cow position: | chr21:23673004-23672836 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 223-385 |
| Cow position: | chr21:29014658-29014826 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 159 |
| Conread position: | 223-385 |
| Cow position: | chr21:30977009-30977172 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 111 |
| Conread position: | 223-389 |
| Cow position: | chr21:27863260-27863433 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 223-390 |
| Cow position: | chr21:42135360-42135537 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 230-383 |
| Cow position: | chr21:28810023-28810176 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 140, 114 |
| Conread position: | 231-379 |
| Cow position: | chr21:31691723-31691575 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 235-383 |
| Cow position: | chr21:41287549-41287707 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 235-387 |
| Cow position: | chr21:14760804-14760647 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 239-370 |
| Cow position: | chr21:2294259-2294122 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 252-393 |
| Cow position: | chr21:6735963-6736113 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 257-369 |
| Cow position: | chr21:44860906-44861019 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 257-374 |
| Cow position: | chr21:30205160-30205278 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 257-383 |
| Cow position: | chr21:13043800-13043934 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 129 |
| Conread position: | 273-381 |
| Cow position: | chr21:45329753-45329862 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 276-373 |
| Cow position: | chr21:40546460-40546557 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-379 |
| Cow position: | chr21:3015995-3016097 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 285-383 |
| Cow position: | chr21:7493089-7493187 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-383 |
| Cow position: | chr21:41051072-41050975 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 287-375 |
| Cow position: | chr21:19258999-19258912 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 287-375 |
| Cow position: | chr21:47801803-47801891 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-381 |
| Cow position: | chr21:26567596-26567690 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-382 |
| Cow position: | chr21:27744206-27744112 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 287-383 |
| Cow position: | chr21:868741-868838 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 287-383 |
| Cow position: | chr21:6388181-6388085 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-383 |
| Cow position: | chr21:13584879-13584975 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-383 |
| Cow position: | chr21:23321896-23321992 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-383 |
| Cow position: | chr21:26245096-26245000 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-390 |
| Cow position: | chr21:22939952-22939847 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 289-375 |
| Cow position: | chr21:41974198-41974284 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-383 |
| Cow position: | chr21:42562806-42562716 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 291-383 |
| Cow position: | chr21:28924287-28924195 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-383 |
| Cow position: | chr21:40305121-40305029 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-383 |
| Cow position: | chr21:30835540-30835449 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-390 |
| Cow position: | chr21:36795780-36795682 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-403 |
| Cow position: | chr21:37361065-37361176 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-383 |
| Cow position: | chr21:42413922-42414011 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-382 |
| Cow position: | chr21:38267888-38267975 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.