Cow genome map

Conread name: reye1630b_c2r1.y1

Conread position: 180-390
Cow position: chr27:6319643-6319860 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 30

Conread position: 185-383
Cow position: chr27:26441306-26441115 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 15

Conread position: 186-383
Cow position: chr27:8791018-8790807 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 24

Conread position: 193-373
Cow position: chr27:22212891-22213082 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 69

Conread position: 194-384
Cow position: chr27:29431210-29431405 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 9

Conread position: 196-382
Cow position: chr27:4858884-4858706 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 33

Conread position: 199-383
Cow position: chr27:29388408-29388606 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 201-381
Cow position: chr27:25879857-25880034 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 86

Conread position: 203-383
Cow position: chr27:26400977-26400787 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 205-382
Cow position: chr27:4414072-4413886 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 27

Conread position: 207-383
Cow position: chr27:13251775-13251951 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 32

Conread position: 209-373
Cow position: chr27:15434081-15434249 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 15

Conread position: 209-375
Cow position: chr27:23929725-23929893 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 131

Conread position: 209-379
Cow position: chr27:22035624-22035447 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 209-382
Cow position: chr27:28002055-28001879 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 15

Conread position: 209-393
Cow position: chr27:20888483-20888664 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 210-357
Cow position: chr27:27055045-27055197 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 14

Conread position: 210-375
Cow position: chr27:16246557-16246728 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 12

Conread position: 210-383
Cow position: chr27:13411621-13411435 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 129

Conread position: 210-384
Cow position: chr27:15867142-15867325 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 77, 14

Conread position: 211-360
Cow position: chr27:22708579-22708718 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 211-375
Cow position: chr27:20749252-20749084 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 82, 13

Conread position: 211-376
Cow position: chr27:2949567-2949400 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 40

Conread position: 211-380
Cow position: chr27:6541385-6541563 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 13

Conread position: 211-380
Cow position: chr27:29504881-29504718 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 211-381
Cow position: chr27:10394719-10394884 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 211-381
Cow position: chr27:24477175-24477349 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 211-383
Cow position: chr27:17397703-17397520 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 211-383
Cow position: chr27:20048387-20048568 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 13

Conread position: 211-383
Cow position: chr27:22497777-22497956 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 82, 0

Conread position: 212-395
Cow position: chr27:25382386-25382205 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 12

Conread position: 213-390
Cow position: chr27:13204216-13204400 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 163

Conread position: 213-390
Cow position: chr27:19741641-19741467 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 85

Conread position: 214-381
Cow position: chr27:1184422-1184245 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 40

Conread position: 215-379
Cow position: chr27:20283397-20283566 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 215-379
Cow position: chr27:31556847-31557007 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 37

Conread position: 215-382
Cow position: chr27:14226586-14226756 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 78

Conread position: 215-383
Cow position: chr27:16705006-16705185 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 215-386
Cow position: chr27:27141080-27141250 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 216-341
Cow position: chr27:8792082-8791952 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 216-345
Cow position: chr27:30558399-30558523 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 216-369
Cow position: chr27:10350591-10350436 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 83, 40

Conread position: 216-374
Cow position: chr27:6151068-6151223 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 216-377
Cow position: chr27:4944752-4944586 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 216-379
Cow position: chr27:24341675-24341834 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 71

Conread position: 216-380
Cow position: chr27:20093059-20092903 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 216-381
Cow position: chr27:2957171-2957344 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 216-381
Cow position: chr27:14343681-14343516 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 46

Conread position: 216-381
Cow position: chr27:15524034-15523866 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 128

Conread position: 216-382
Cow position: chr27:18435376-18435200 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 216-383
Cow position: chr27:2847627-2847788 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 216-383
Cow position: chr27:6162649-6162476 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 216-383
Cow position: chr27:14937656-14937496 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 41

Conread position: 216-383
Cow position: chr27:19544147-19543986 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 216-383
Cow position: chr27:25998479-25998636 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 34

Conread position: 216-387
Cow position: chr27:21951226-21951040 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 216-389
Cow position: chr27:16512413-16512231 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 216-390
Cow position: chr27:11746361-11746529 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 68

Conread position: 216-390
Cow position: chr27:15332535-15332354 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 11

Conread position: 216-390
Cow position: chr27:26643457-26643626 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 36

Conread position: 216-391
Cow position: chr27:22330904-22330724 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 217-370
Cow position: chr27:4411936-4411786 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 68

Conread position: 217-371
Cow position: chr27:4195310-4195469 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 133

Conread position: 217-383
Cow position: chr27:21578801-21578640 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 218-365
Cow position: chr27:67993-68142 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 62

Conread position: 218-383
Cow position: chr27:17875367-17875208 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 66

Conread position: 218-383
Cow position: chr27:29039165-29039007 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 219-357
Cow position: chr27:20561345-20561490 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 219-358
Cow position: chr27:21448065-21447920 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 219-383
Cow position: chr27:1637169-1637001 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 68, 99

Conread position: 219-385
Cow position: chr27:13940794-13940621 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 34

Conread position: 219-392
Cow position: chr27:7847483-7847663 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 72

Conread position: 222-344
Cow position: chr27:5227554-5227427 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 60

Conread position: 222-350
Cow position: chr27:16026280-16026152 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 222-381
Cow position: chr27:23495935-23495777 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 222-382
Cow position: chr27:19083938-19083784 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 62

Conread position: 222-383
Cow position: chr27:3306546-3306708 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 158

Conread position: 222-383
Cow position: chr27:17102660-17102830 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 120

Conread position: 223-379
Cow position: chr27:12596543-12596707 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 223-383
Cow position: chr27:299613-299447 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 155

Conread position: 223-406
Cow position: chr27:30444913-30444720 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 98

Conread position: 224-375
Cow position: chr27:10992136-10992283 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 228-379
Cow position: chr27:31031233-31031385 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 22

Conread position: 228-381
Cow position: chr27:26909822-26909659 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 230-385
Cow position: chr27:22792607-22792768 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 230-390
Cow position: chr27:21393725-21393566 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 132
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 235-382
Cow position: chr27:18406573-18406718 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 50

Conread position: 241-383
Cow position: chr27:20037320-20037182 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 47

Conread position: 243-383
Cow position: chr27:17646376-17646234 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 257-383
Cow position: chr27:20812710-20812839 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 111
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 282-383
Cow position: chr27:19452833-19452936 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 287-383
Cow position: chr27:14169238-14169334 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 287-383
Cow position: chr27:17918475-17918379 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 287-383
Cow position: chr27:17918879-17918783 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 287-383
Cow position: chr27:27255826-27255922 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 287-383
Cow position: chr27:30359245-30359341 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 291-383
Cow position: chr27:12246496-12246587 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 0

Show alignments to all cow chromosomes.