Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 126
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 192
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 224
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-154
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-191
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 218
               

               Conread position:
               2-249
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 219
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               2-266
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               2-304
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 111
               

               Conread position:
               2-439
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               2-439
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               2-512
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 154
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               3-195
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               3-468
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 94
               

               Conread position:
               3-507
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 59
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               4-151
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               4-191
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 127
               

               Conread position:
               4-438
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 400
               

               Conread position:
               4-535
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 137
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               5-537
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               6-226
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               7-536
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               11-531
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               13-311
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               238, 8
               

               Conread position:
               19-374
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 292
               

               Conread position:
               19-439
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               20-510
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 100
               

               Conread position:
               31-525
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               32-453
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               102, 84
               

               Conread position:
               41-536
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               42-314
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 171
               

               Conread position:
               42-375
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               117, 112
               

               Conread position:
               50-338
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               50-530
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 264
               

               Conread position:
               51-531
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 31
               

               Conread position:
               53-201
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 87
               

               Conread position:
               58-535
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               62-468
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 93
               

               Conread position:
               73-368
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               78-330
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               87-534
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               101-304
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               141-536
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               158-327
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               180-397
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               187-329
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               67, 116
               
Show alignments to all cow chromosomes.