Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               1-373
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 229
               

               Conread position:
               1-526
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 140
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               2-275
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               2-279
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               19, 289
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 120
               

               Conread position:
               2-506
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               2-533
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 321
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 151
               

               Conread position:
               4-375
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               4-519
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 520
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               8-298
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               9-536
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 283
               

               Conread position:
               17-212
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 145
               

               Conread position:
               20-217
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               120, 151
               

               Conread position:
               20-510
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 120
               

               Conread position:
               24-191
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 120
               

               Conread position:
               31-222
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               34-534
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               58-537
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               59-537
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               69-504
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 57
               

               Conread position:
               100-351
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 135
               

               Conread position:
               103-507
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 362
               

               Conread position:
               108-447
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 321
               

               Conread position:
               140-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               140-536
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 26
               

               Conread position:
               144-536
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               155-372
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.