Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 187
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 243
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               2-453
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 204
               

               Conread position:
               2-478
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               2-524
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 171
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 161
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 181
               

               Conread position:
               3-439
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               4-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               32-316
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               199, 41
               

               Conread position:
               42-536
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               43-462
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               45-536
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               51-458
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               55-337
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 88
               

               Conread position:
               55-510
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               64-512
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               80-366
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 137
               

               Conread position:
               85-427
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               55, 135
               

               Conread position:
               108-380
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               141-444
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               249-528
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 204
               
Show alignments to all cow chromosomes.