Cow genome map
Conread name: | rfat0139_b21.y1 |
Conread position: | 1-207 |
Cow position: | chr14:25363302-25363509 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 155 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 1-257 |
Cow position: | chr14:30417336-30417588 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 146, 20 |
Conread position: | 1-342 |
Cow position: | chr14:36109702-36110037 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 60 |
Conread position: | 1-382 |
Cow position: | chr14:35001143-35000774 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 262 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 20, 56 |
Conread position: | 1-420 |
Cow position: | chr14:33834876-33835306 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 1-422 |
Cow position: | chr14:31932880-31933311 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 289 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 20, 49 |
Conread position: | 1-535 |
Cow position: | chr14:25430784-25430237 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 172 |
Conread position: | 1-536 |
Cow position: | chr14:44584373-44583828 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 117 |
Conread position: | 1-536 |
Cow position: | chr14:49219466-49218929 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 96 |
Conread position: | 2-180 |
Cow position: | chr14:41488600-41488777 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 8, 13 |
Conread position: | 2-245 |
Cow position: | chr14:38016683-38016438 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 2-260 |
Cow position: | chr14:17651088-17650828 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 139 |
Conread position: | 2-304 |
Cow position: | chr14:42849468-42849777 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 298 |
Conread position: | 2-321 |
Cow position: | chr14:32580408-32580089 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 20, 29 |
Conread position: | 2-345 |
Cow position: | chr14:12951252-12950905 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 167 |
Conread position: | 2-360 |
Cow position: | chr14:8902282-8901920 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 257 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 19, 159 |
Conread position: | 2-449 |
Cow position: | chr14:26449392-26449841 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 300 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 132, 82 |
Conread position: | 2-485 |
Cow position: | chr14:48851014-48851527 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 329 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 24, 507 |
Conread position: | 2-510 |
Cow position: | chr14:39301593-39301083 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 55 |
Conread position: | 2-515 |
Cow position: | chr14:35604216-35603699 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 98 |
Conread position: | 2-529 |
Cow position: | chr14:11564668-11564132 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 131 |
Conread position: | 2-531 |
Cow position: | chr14:47937977-47938499 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 214 |
Conread position: | 2-534 |
Cow position: | chr14:14420271-14420814 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 138 |
Conread position: | 2-536 |
Cow position: | chr14:13282914-13282379 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 65 |
Conread position: | 2-536 |
Cow position: | chr14:37136942-37136397 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 304 |
Conread position: | 2-536 |
Cow position: | chr14:46549259-46548731 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 18 |
Conread position: | 3-272 |
Cow position: | chr14:30131517-30131249 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 159 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 3-352 |
Cow position: | chr14:47645557-47645204 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 63 |
Conread position: | 3-419 |
Cow position: | chr14:32059892-32060302 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 291 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 131, 17 |
Conread position: | 3-444 |
Cow position: | chr14:13416411-13415971 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 64 |
Conread position: | 3-485 |
Cow position: | chr14:23229665-23230128 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 320 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 18, 78 |
Conread position: | 3-531 |
Cow position: | chr14:29709048-29708550 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 356 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 131, 16 |
Conread position: | 4-212 |
Cow position: | chr14:24113139-24113343 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 26, 103 |
Conread position: | 4-212 |
Cow position: | chr14:35361381-35361586 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 80, 27 |
Conread position: | 4-303 |
Cow position: | chr14:29568957-29569249 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 18, 80 |
Conread position: | 4-332 |
Cow position: | chr14:13092947-13092612 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 228 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 13, 63 |
Conread position: | 4-380 |
Cow position: | chr14:17610941-17610562 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 57 |
Conread position: | 5-519 |
Cow position: | chr14:38150253-38149728 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 176 |
Conread position: | 6-468 |
Cow position: | chr14:23626081-23626548 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 301 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 26, 340 |
Conread position: | 6-491 |
Cow position: | chr14:47593482-47592987 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 79 |
Conread position: | 6-536 |
Cow position: | chr14:20706811-20706283 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 188 |
Conread position: | 7-512 |
Cow position: | chr14:45238464-45237943 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 135 |
Conread position: | 9-279 |
Cow position: | chr14:38741618-38741885 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 12-537 |
Cow position: | chr14:45192648-45192118 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 230 |
Conread position: | 20-504 |
Cow position: | chr14:18323056-18322572 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 114 |
Conread position: | 24-258 |
Cow position: | chr14:44712024-44711789 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 226, 102 |
Conread position: | 24-367 |
Cow position: | chr14:20673495-20673834 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 236 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 212, 69 |
Conread position: | 25-181 |
Cow position: | chr14:21746312-21746155 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 33, 93 |
Conread position: | 31-442 |
Cow position: | chr14:31400385-31400801 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 108 |
Conread position: | 32-536 |
Cow position: | chr14:14030299-14030810 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 160 |
Conread position: | 34-492 |
Cow position: | chr14:14076192-14075745 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 52 |
Conread position: | 34-536 |
Cow position: | chr14:34055594-34055094 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 101 |
Conread position: | 36-537 |
Cow position: | chr14:30659381-30659876 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 149 |
Conread position: | 43-380 |
Cow position: | chr14:7598857-7598521 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 81 |
Conread position: | 47-537 |
Cow position: | chr14:25234675-25235157 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 94-534 |
Cow position: | chr14:48146923-48147352 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 120 |
Conread position: | 101-471 |
Cow position: | chr14:41962553-41962934 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 251 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 30, 135 |
Show alignments to all cow chromosomes.