Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 172
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 117
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               2-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               2-304
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 298
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               2-360
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 159
               

               Conread position:
               2-449
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               300
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               132, 82
               

               Conread position:
               2-485
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               329
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               24, 507
               

               Conread position:
               2-510
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               2-515
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               2-529
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               2-531
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 214
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 304
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               3-352
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               131, 17
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               3-485
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               3-531
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               356
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               131, 16
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               4-332
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               4-380
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 176
               

               Conread position:
               6-468
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 340
               

               Conread position:
               6-491
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               7-512
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               9-279
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               12-537
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 230
               

               Conread position:
               20-504
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 114
               

               Conread position:
               24-258
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               226, 102
               

               Conread position:
               24-367
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               212, 69
               

               Conread position:
               25-181
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               31-442
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 108
               

               Conread position:
               32-536
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 160
               

               Conread position:
               34-492
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               34-536
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               36-537
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               43-380
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 81
               

               Conread position:
               47-537
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               94-534
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 120
               

               Conread position:
               101-471
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 135
               
Show alignments to all cow chromosomes.