Cow genome map
Conread name: | rfat0139_b21.y1 |
Conread position: | 1-516 |
Cow position: | chr15:24097733-24097220 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 157 |
Conread position: | 2-149 |
Cow position: | chr15:52740235-52740087 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 19, 111 |
Conread position: | 2-191 |
Cow position: | chr15:21916233-21916045 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 146 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 127, 25 |
Conread position: | 2-202 |
Cow position: | chr15:22451838-22451634 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 2-202 |
Cow position: | chr15:43047544-43047342 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 19, 82 |
Conread position: | 2-212 |
Cow position: | chr15:8937546-8937334 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 2-322 |
Cow position: | chr15:1877524-1877200 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 64 |
Conread position: | 2-349 |
Cow position: | chr15:23561167-23560818 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 62 |
Conread position: | 2-446 |
Cow position: | chr15:32877151-32876714 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 117 |
Conread position: | 2-452 |
Cow position: | chr15:2436626-2436183 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 13 |
Conread position: | 2-498 |
Cow position: | chr15:28479763-28480268 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 331 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 127, 38 |
Conread position: | 2-531 |
Cow position: | chr15:21156598-21156059 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 261 |
Conread position: | 2-534 |
Cow position: | chr15:4626284-4626822 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 82 |
Conread position: | 2-534 |
Cow position: | chr15:17681155-17681682 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 19 |
Conread position: | 2-537 |
Cow position: | chr15:37632140-37631609 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 176 |
Conread position: | 3-301 |
Cow position: | chr15:22855420-22855725 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 216 |
Conread position: | 3-460 |
Cow position: | chr15:52464112-52464577 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 213 |
Conread position: | 3-469 |
Cow position: | chr15:31989287-31989761 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 91 |
Conread position: | 3-491 |
Cow position: | chr15:30726103-30726581 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 205 |
Conread position: | 3-537 |
Cow position: | chr15:8629442-8628902 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 4-245 |
Cow position: | chr15:19214944-19215188 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 187 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 16, 99 |
Conread position: | 4-369 |
Cow position: | chr15:1760637-1760272 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 243 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 129, 15 |
Conread position: | 4-373 |
Cow position: | chr15:13417398-13417017 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 83 |
Conread position: | 4-391 |
Cow position: | chr15:8061317-8060935 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 84 |
Conread position: | 4-536 |
Cow position: | chr15:22154783-22154233 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 59 |
Conread position: | 5-536 |
Cow position: | chr15:50870579-50870054 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 11 |
Conread position: | 32-534 |
Cow position: | chr15:25554245-25553737 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 75 |
Conread position: | 33-536 |
Cow position: | chr15:21366500-21367026 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 310 |
Conread position: | 34-333 |
Cow position: | chr15:3562448-3562761 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 225 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 38-531 |
Cow position: | chr15:47341583-47341108 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 24 |
Conread position: | 51-249 |
Cow position: | chr15:53013510-53013713 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 147 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 25, 196 |
Conread position: | 52-236 |
Cow position: | chr15:43054836-43055022 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 55-536 |
Cow position: | chr15:17700270-17699789 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 147 |
Conread position: | 65-534 |
Cow position: | chr15:6081766-6081295 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 51 |
Conread position: | 111-461 |
Cow position: | chr15:11664708-11664360 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 226 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 40, 134 |
Conread position: | 139-430 |
Cow position: | chr15:23057666-23057958 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 218 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 114, 58 |
Conread position: | 141-455 |
Cow position: | chr15:2445754-2446076 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 218 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 103, 42 |
Conread position: | 144-536 |
Cow position: | chr15:21967027-21966627 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 140 |
Show alignments to all cow chromosomes.