Cow genome map

Conread name: rfat0139_b21.y1

Conread position: 1-516
Cow position: chr15:24097733-24097220 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 157

Conread position: 2-149
Cow position: chr15:52740235-52740087 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 111

Conread position: 2-191
Cow position: chr15:21916233-21916045 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 127, 25

Conread position: 2-202
Cow position: chr15:22451838-22451634 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 2-202
Cow position: chr15:43047544-43047342 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 82

Conread position: 2-212
Cow position: chr15:8937546-8937334 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 2-322
Cow position: chr15:1877524-1877200 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 2-349
Cow position: chr15:23561167-23560818 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 2-446
Cow position: chr15:32877151-32876714 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 117

Conread position: 2-452
Cow position: chr15:2436626-2436183 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 13

Conread position: 2-498
Cow position: chr15:28479763-28480268 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 331
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 127, 38

Conread position: 2-531
Cow position: chr15:21156598-21156059 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 261

Conread position: 2-534
Cow position: chr15:4626284-4626822 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 2-534
Cow position: chr15:17681155-17681682 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 19

Conread position: 2-537
Cow position: chr15:37632140-37631609 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 176

Conread position: 3-301
Cow position: chr15:22855420-22855725 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 216

Conread position: 3-460
Cow position: chr15:52464112-52464577 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 3-469
Cow position: chr15:31989287-31989761 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 91

Conread position: 3-491
Cow position: chr15:30726103-30726581 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 205

Conread position: 3-537
Cow position: chr15:8629442-8628902 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 4-245
Cow position: chr15:19214944-19215188 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 99

Conread position: 4-369
Cow position: chr15:1760637-1760272 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 129, 15

Conread position: 4-373
Cow position: chr15:13417398-13417017 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 83

Conread position: 4-391
Cow position: chr15:8061317-8060935 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 84

Conread position: 4-536
Cow position: chr15:22154783-22154233 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 5-536
Cow position: chr15:50870579-50870054 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 11

Conread position: 32-534
Cow position: chr15:25554245-25553737 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 75

Conread position: 33-536
Cow position: chr15:21366500-21367026 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 310

Conread position: 34-333
Cow position: chr15:3562448-3562761 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 53

Conread position: 38-531
Cow position: chr15:47341583-47341108 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 51-249
Cow position: chr15:53013510-53013713 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 196

Conread position: 52-236
Cow position: chr15:43054836-43055022 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 55-536
Cow position: chr15:17700270-17699789 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 147

Conread position: 65-534
Cow position: chr15:6081766-6081295 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 51

Conread position: 111-461
Cow position: chr15:11664708-11664360 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 134

Conread position: 139-430
Cow position: chr15:23057666-23057958 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 114, 58

Conread position: 141-455
Cow position: chr15:2445754-2446076 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 42

Conread position: 144-536
Cow position: chr15:21967027-21966627 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 140

Show alignments to all cow chromosomes.