Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-516
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               2-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               127, 25
               

               Conread position:
               2-202
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-202
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               2-349
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               2-446
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 117
               

               Conread position:
               2-452
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 13
               

               Conread position:
               2-498
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               2-531
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 261
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 216
               

               Conread position:
               3-460
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 213
               

               Conread position:
               3-469
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               3-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 205
               

               Conread position:
               3-537
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               4-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               4-373
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 83
               

               Conread position:
               4-391
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               5-536
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 11
               

               Conread position:
               32-534
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 75
               

               Conread position:
               33-536
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 310
               

               Conread position:
               34-333
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               38-531
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               51-249
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 196
               

               Conread position:
               52-236
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               55-536
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               65-534
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 51
               

               Conread position:
               111-461
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 134
               

               Conread position:
               139-430
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               141-455
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               144-536
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 140
               
Show alignments to all cow chromosomes.