Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 214
               

               Conread position:
               2-312
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 160
               

               Conread position:
               2-351
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 314
               

               Conread position:
               2-452
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 137
               

               Conread position:
               2-519
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               2-531
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               3-199
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-510
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               340
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 318
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               5-312
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 169
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               10-467
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               24-536
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 419
               

               Conread position:
               26-261
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               28-368
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               34-536
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 178
               

               Conread position:
               36-490
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 24
               

               Conread position:
               45-530
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 117
               

               Conread position:
               47-535
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               76-502
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               82-319
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 172
               

               Conread position:
               83-536
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               102-380
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               158, 32
               

               Conread position:
               139-530
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               140-536
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               171-531
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 238
               

               Conread position:
               183-536
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 8
               
Show alignments to all cow chromosomes.