Cow genome map
Conread name: | rfat0139_b21.y1 |
Conread position: | 1-374 |
Cow position: | chr17:2698903-2698522 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 57 |
Conread position: | 1-486 |
Cow position: | chr17:19369793-19369300 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 144 |
Conread position: | 2-183 |
Cow position: | chr17:28772262-28772443 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 147 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 131, 19 |
Conread position: | 2-184 |
Cow position: | chr17:38701215-38701039 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 2-199 |
Cow position: | chr17:35620158-35620352 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 132, 12 |
Conread position: | 2-226 |
Cow position: | chr17:19133471-19133694 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 137 |
Conread position: | 2-238 |
Cow position: | chr17:12477217-12476984 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 19, 127 |
Conread position: | 2-240 |
Cow position: | chr17:15701354-15701588 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 20, 101 |
Conread position: | 2-311 |
Cow position: | chr17:16416732-16417043 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 216 |
Conread position: | 2-380 |
Cow position: | chr17:17086691-17087057 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 255 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 131, 26 |
Conread position: | 2-438 |
Cow position: | chr17:8067898-8068326 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 19 |
Conread position: | 2-450 |
Cow position: | chr17:18198703-18198244 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 2-528 |
Cow position: | chr17:23722967-23722431 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 146 |
Conread position: | 2-531 |
Cow position: | chr17:26173718-26173229 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 353 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 20, 66 |
Conread position: | 2-536 |
Cow position: | chr17:22563493-22562951 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 154 |
Conread position: | 2-537 |
Cow position: | chr17:158641-158088 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 175 |
Conread position: | 2-537 |
Cow position: | chr17:30413317-30412772 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 490 |
Conread position: | 3-333 |
Cow position: | chr17:34003934-34004289 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 244 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 19, 65 |
Conread position: | 3-535 |
Cow position: | chr17:3315437-3314910 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 71 |
Conread position: | 3-537 |
Cow position: | chr17:2179188-2178672 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 3-537 |
Cow position: | chr17:20643057-20642518 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 86 |
Conread position: | 4-339 |
Cow position: | chr17:40282349-40282019 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 18 |
Conread position: | 4-346 |
Cow position: | chr17:8351841-8351496 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 237 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 18, 109 |
Conread position: | 4-459 |
Cow position: | chr17:23337705-23338170 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 309 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 4-537 |
Cow position: | chr17:13935800-13936329 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 121 |
Conread position: | 5-534 |
Cow position: | chr17:17133677-17133152 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 27 |
Conread position: | 7-260 |
Cow position: | chr17:24312469-24312213 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 191 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 15, 62 |
Conread position: | 17-391 |
Cow position: | chr17:9001652-9001300 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 233, 71 |
Conread position: | 24-536 |
Cow position: | chr17:20055443-20054942 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 39 |
Conread position: | 25-348 |
Cow position: | chr17:32407360-32407686 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 6 |
Conread position: | 32-536 |
Cow position: | chr17:19405996-19406492 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 80 |
Conread position: | 34-536 |
Cow position: | chr17:241611-241095 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 183 |
Conread position: | 52-536 |
Cow position: | chr17:31310942-31311423 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 74 |
Conread position: | 59-438 |
Cow position: | chr17:3237702-3237330 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 265 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 63, 82 |
Conread position: | 120-537 |
Cow position: | chr17:11025131-11024702 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 19 |
Conread position: | 163-534 |
Cow position: | chr17:21066485-21066860 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 53 |
Conread position: | 166-537 |
Cow position: | chr17:24292817-24292440 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 114 |
Conread position: | 186-434 |
Cow position: | chr17:4941046-4941304 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 63, 246 |
Show alignments to all cow chromosomes.