Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               1-510
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               1-537
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               2-342
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               2-349
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               2-506
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               2-527
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 92
               

               Conread position:
               2-532
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 489
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               347
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 70
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               3-510
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 202
               

               Conread position:
               3-535
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               4-196
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-373
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               4-380
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               6-345
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               10-460
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               18-222
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               24-352
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               24-536
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 158
               

               Conread position:
               25-237
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               25-361
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               31-455
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 18
               

               Conread position:
               42-191
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               61-357
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               190, 79
               

               Conread position:
               139-480
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 77
               

               Conread position:
               155-361
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               162-332
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               92, 21
               
Show alignments to all cow chromosomes.