Cow genome map

Conread name: rfat0139_b21.y1

Conread position: 1-194
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 73

Conread position: 1-260
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 248

Conread position: 1-335
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 116

Conread position: 1-535
Cow position:
Alignm length: 541
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 201

Conread position: 2-258
Cow position:
Alignm length: 261
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 89

Conread position: 2-260
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 58

Conread position: 2-264
Cow position:
Alignm length: 268
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 249

Conread position: 2-326
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 9

Conread position: 2-328
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 208

Conread position: 2-345
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 99

Conread position: 2-373
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 176

Conread position: 2-375
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 2-513
Cow position:
Alignm length: 521
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 19

Conread position: 2-530
Cow position:
Alignm length: 547
Alignm identity: 355
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 47

Conread position: 2-531
Cow position:
Alignm length: 542
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 2-534
Cow position:
Alignm length: 561
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 142

Conread position: 2-535
Cow position:
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 2-536
Cow position:
Alignm length: 545
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 86

Conread position: 2-536
Cow position:
Alignm length: 548
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 2-536
Cow position:
Alignm length: 546
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 51

Conread position: 3-191
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 47

Conread position: 3-303
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 3-313
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 30

Conread position: 3-523
Cow position:
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 90

Conread position: 3-536
Cow position:
Alignm length: 550
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 3-536
Cow position:
Alignm length: 541
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 3-536
Cow position:
Alignm length: 552
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 122

Conread position: 3-536
Cow position:
Alignm length: 560
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 73

Conread position: 3-537
Cow position:
Alignm length: 538
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 128

Conread position: 4-196
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 49

Conread position: 4-379
Cow position:
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 21

Conread position: 4-535
Cow position:
Alignm length: 557
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 317

Conread position: 5-536
Cow position:
Alignm length: 543
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 6-225
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 55

Conread position: 7-339
Cow position:
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 91

Conread position: 16-259
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 26

Conread position: 16-345
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 17-354
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 161

Conread position: 20-537
Cow position:
Alignm length: 530
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 63

Conread position: 28-460
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 159

Conread position: 30-536
Cow position:
Alignm length: 511
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 99

Conread position: 32-495
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 451

Conread position: 38-530
Cow position:
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 177

Conread position: 45-537
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 62

Conread position: 49-337
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 45

Conread position: 55-444
Cow position:
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 51

Conread position: 57-265
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 148

Conread position: 60-357
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 154, 84

Conread position: 73-345
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 232

Conread position: 76-472
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 78-387
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 265

Conread position: 91-536
Cow position:
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 111

Conread position: 100-432
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 16

Conread position: 114-322
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 144-536
Cow position:
Alignm length: 407
Alignm identity: 268
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 10

Show alignments to all cow chromosomes.