Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-372 |
| Cow position: | chr22:22322683-22322316 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 1-525 |
| Cow position: | chr22:17923123-17923645 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 1-534 |
| Cow position: | chr22:13209861-13209322 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 1-537 |
| Cow position: | chr22:14731557-14732102 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 2-194 |
| Cow position: | chr22:32359056-32359248 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 2-250 |
| Cow position: | chr22:44504296-44504538 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 2-277 |
| Cow position: | chr22:33113612-33113333 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 2-330 |
| Cow position: | chr22:5263073-5263409 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 2-333 |
| Cow position: | chr22:138250-137934 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 2-340 |
| Cow position: | chr22:11305363-11305016 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 2-440 |
| Cow position: | chr22:3065325-3065765 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 2-512 |
| Cow position: | chr22:31416921-31416403 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 339 |
| Conread position: | 2-534 |
| Cow position: | chr22:7280020-7279481 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 2-535 |
| Cow position: | chr22:16103784-16103244 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 3-212 |
| Cow position: | chr22:11489668-11489463 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 3-212 |
| Cow position: | chr22:21935393-21935603 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 3-239 |
| Cow position: | chr22:30176184-30175951 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 3-310 |
| Cow position: | chr22:45543469-45543779 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 3-375 |
| Cow position: | chr22:44515457-44515828 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 234 |
| Conread position: | 3-377 |
| Cow position: | chr22:2389912-2390290 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 4-304 |
| Cow position: | chr22:304436-304139 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 131, 104 |
| Conread position: | 4-372 |
| Cow position: | chr22:43045239-43045610 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 235, 298 |
| Conread position: | 4-375 |
| Cow position: | chr22:18844277-18844654 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 4-395 |
| Cow position: | chr22:17069975-17069605 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 4-536 |
| Cow position: | chr22:14058737-14058206 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 4-537 |
| Cow position: | chr22:34884163-34883637 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 365 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 8-520 |
| Cow position: | chr22:30067045-30067555 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 191 |
| Conread position: | 10-534 |
| Cow position: | chr22:533569-533030 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 10-535 |
| Cow position: | chr22:9371827-9371294 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 20-536 |
| Cow position: | chr22:1027471-1026943 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 117 |
| Conread position: | 21-536 |
| Cow position: | chr22:15889268-15888748 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 34 |
| Conread position: | 31-319 |
| Cow position: | chr22:30630257-30629967 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 75 |
| Conread position: | 34-414 |
| Cow position: | chr22:657-291 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 182, 19 |
| Conread position: | 55-536 |
| Cow position: | chr22:1864068-1863582 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 55-536 |
| Cow position: | chr22:30918506-30918024 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 28 |
| Conread position: | 63-534 |
| Cow position: | chr22:14536064-14536509 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 32 |
| Conread position: | 139-379 |
| Cow position: | chr22:44799277-44799522 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 110, 177 |
| Conread position: | 169-534 |
| Cow position: | chr22:11970080-11970434 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 62 |
Show alignments to all cow chromosomes.