Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-296 |
| Cow position: | chr23:2370492-2370203 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 1-437 |
| Cow position: | chr23:2472828-2473282 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 24, 340 |
| Conread position: | 1-531 |
| Cow position: | chr23:20170734-20171265 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 1-535 |
| Cow position: | chr23:16057169-16056651 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 1-536 |
| Cow position: | chr23:27974476-27975000 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 31 |
| Conread position: | 2-211 |
| Cow position: | chr23:9152431-9152640 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 2-391 |
| Cow position: | chr23:34468938-34469325 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 2-437 |
| Cow position: | chr23:954329-954771 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 2-536 |
| Cow position: | chr23:9193433-9193968 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 2-536 |
| Cow position: | chr23:25357817-25357273 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 487 |
| Conread position: | 2-536 |
| Cow position: | chr23:28364315-28363796 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 3-212 |
| Cow position: | chr23:11405215-11405424 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 3-315 |
| Cow position: | chr23:40539216-40539526 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 3-489 |
| Cow position: | chr23:10905348-10904861 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 193 |
| Conread position: | 3-510 |
| Cow position: | chr23:41538127-41537611 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 333 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 3-524 |
| Cow position: | chr23:19637436-19637931 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 341 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 4-345 |
| Cow position: | chr23:25565462-25565111 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 5-534 |
| Cow position: | chr23:4798711-4799241 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 5-536 |
| Cow position: | chr23:28113999-28114526 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 6-375 |
| Cow position: | chr23:10424393-10424028 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 6-485 |
| Cow position: | chr23:38584385-38583900 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 6-535 |
| Cow position: | chr23:20379615-20379096 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 11-225 |
| Cow position: | chr23:5416209-5415995 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 21-391 |
| Cow position: | chr23:24487249-24487619 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 28-381 |
| Cow position: | chr23:7088886-7088533 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 34-259 |
| Cow position: | chr23:7371632-7371400 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 52-225 |
| Cow position: | chr23:3489629-3489800 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 55-512 |
| Cow position: | chr23:7288135-7288593 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 139-465 |
| Cow position: | chr23:6441700-6442022 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 48 |
| Conread position: | 140-429 |
| Cow position: | chr23:26684272-26683975 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 201 |
Show alignments to all cow chromosomes.