Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-194 |
| Cow position: | chr24:21998875-21999069 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 1-375 |
| Cow position: | chr24:38641935-38641561 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 1-496 |
| Cow position: | chr24:37197158-37197661 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 326 |
| Conread position: | 2-196 |
| Cow position: | chr24:8885526-8885717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 2-332 |
| Cow position: | chr24:16600988-16601321 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 2-467 |
| Cow position: | chr24:9861213-9861683 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 2-535 |
| Cow position: | chr24:12039077-12038529 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 2-536 |
| Cow position: | chr24:6666218-6666762 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 309 |
| Conread position: | 2-536 |
| Cow position: | chr24:32849702-32849159 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 216 |
| Conread position: | 3-181 |
| Cow position: | chr24:40258841-40259016 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 3-195 |
| Cow position: | chr24:32303850-32304042 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 3-222 |
| Cow position: | chr24:573605-573831 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 3-432 |
| Cow position: | chr24:27229772-27230201 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 4-319 |
| Cow position: | chr24:40036392-40036715 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 274 |
| Conread position: | 4-537 |
| Cow position: | chr24:19643850-19643313 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 5-368 |
| Cow position: | chr24:26847045-26847413 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 248 |
| Conread position: | 5-536 |
| Cow position: | chr24:19675376-19674846 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 16 |
| Conread position: | 12-368 |
| Cow position: | chr24:33122480-33122117 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 143 |
| Conread position: | 20-537 |
| Cow position: | chr24:9176469-9176968 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 213, 44 |
| Conread position: | 28-536 |
| Cow position: | chr24:39501061-39501575 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 85 |
| Conread position: | 31-378 |
| Cow position: | chr24:42816178-42815833 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 103, 232 |
| Conread position: | 34-194 |
| Cow position: | chr24:2074133-2073973 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 35-536 |
| Cow position: | chr24:37088611-37089078 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 174 |
| Conread position: | 52-375 |
| Cow position: | chr24:28601519-28601842 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 64-537 |
| Cow position: | chr24:12942826-12942350 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 153 |
| Conread position: | 120-537 |
| Cow position: | chr24:39680936-39680526 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 139-465 |
| Cow position: | chr24:33775047-33775379 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 70, 89 |
| Conread position: | 148-340 |
| Cow position: | chr24:21095111-21095307 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 103, 136 |
Show alignments to all cow chromosomes.