Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-212 |
| Cow position: | chr27:30583425-30583641 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 1-368 |
| Cow position: | chr27:910852-910486 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-439 |
| Cow position: | chr27:12262044-12262482 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 199 |
| Conread position: | 2-174 |
| Cow position: | chr27:4834616-4834443 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-184 |
| Cow position: | chr27:18559462-18559646 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-329 |
| Cow position: | chr27:14859795-14859456 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 2-333 |
| Cow position: | chr27:25676946-25677274 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 2-378 |
| Cow position: | chr27:4824293-4823915 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 2-379 |
| Cow position: | chr27:9262805-9263189 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 288 |
| Conread position: | 2-391 |
| Cow position: | chr27:17565170-17565559 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 80 |
| Conread position: | 2-477 |
| Cow position: | chr27:8291314-8290832 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 317 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 154 |
| Conread position: | 3-323 |
| Cow position: | chr27:3729621-3729304 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 3-380 |
| Cow position: | chr27:26653989-26654351 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 4-327 |
| Cow position: | chr27:1141169-1140837 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 4-453 |
| Cow position: | chr27:18954513-18954056 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 305 |
| Conread position: | 4-537 |
| Cow position: | chr27:8727055-8726510 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 20-478 |
| Cow position: | chr27:12282143-12281683 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 197 |
| Conread position: | 21-188 |
| Cow position: | chr27:3256939-3257101 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 27-391 |
| Cow position: | chr27:30783349-30782980 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 128 |
| Conread position: | 33-212 |
| Cow position: | chr27:13695545-13695366 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 36-195 |
| Cow position: | chr27:14910246-14910089 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 87-374 |
| Cow position: | chr27:25885208-25884923 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 139-526 |
| Cow position: | chr27:27742522-27742145 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 30 |
| Conread position: | 154-424 |
| Cow position: | chr27:29890726-29890457 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 168-530 |
| Cow position: | chr27:21203901-21204273 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 321 |
Show alignments to all cow chromosomes.