Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 154
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 290
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               2-426
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               2-527
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 413
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               3-531
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 197
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               4-377
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 8
               

               Conread position:
               4-392
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 61
               

               Conread position:
               4-495
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               328
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               4-496
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 155
               

               Conread position:
               4-535
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               7-515
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 194
               

               Conread position:
               8-534
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               11-537
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 189
               

               Conread position:
               12-373
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               21-354
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               220, 63
               

               Conread position:
               25-536
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               25-537
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 64
               

               Conread position:
               28-536
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               44-380
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               165, 247
               

               Conread position:
               52-397
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 142
               

               Conread position:
               52-532
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 9
               

               Conread position:
               53-368
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               73-378
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               176, 39
               

               Conread position:
               83-391
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               98-354
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               102-457
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               133-536
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 109
               
Show alignments to all cow chromosomes.