Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-212 |
| Cow position: | chr4:20586148-20586360 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 1-294 |
| Cow position: | chr4:45499380-45499093 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 1-530 |
| Cow position: | chr4:48503051-48502525 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 1-536 |
| Cow position: | chr4:45653965-45654510 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 2-196 |
| Cow position: | chr4:15119193-15118993 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-226 |
| Cow position: | chr4:10093211-10092991 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 2-254 |
| Cow position: | chr4:45764781-45765027 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 2-375 |
| Cow position: | chr4:60224667-60225045 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 206 |
| Conread position: | 2-380 |
| Cow position: | chr4:21056445-21056077 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 2-419 |
| Cow position: | chr4:26399994-26399570 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 2-490 |
| Cow position: | chr4:5979775-5980259 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 2-532 |
| Cow position: | chr4:6631098-6631642 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 355 |
| Conread position: | 2-534 |
| Cow position: | chr4:27178035-27177494 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 486 |
| Conread position: | 2-535 |
| Cow position: | chr4:9821339-9820814 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 2-535 |
| Cow position: | chr4:33148490-33147971 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 114 |
| Conread position: | 2-535 |
| Cow position: | chr4:44646539-44647085 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 2-536 |
| Cow position: | chr4:66900814-66900292 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 3-193 |
| Cow position: | chr4:46152229-46152421 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 3-318 |
| Cow position: | chr4:61272383-61272701 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 3-367 |
| Cow position: | chr4:10613985-10614353 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 3-421 |
| Cow position: | chr4:44685066-44685484 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 168 |
| Conread position: | 3-463 |
| Cow position: | chr4:48496884-48496413 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 4-334 |
| Cow position: | chr4:42639090-42639423 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 4-350 |
| Cow position: | chr4:9168889-9169239 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 4-485 |
| Cow position: | chr4:17471642-17471159 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 4-509 |
| Cow position: | chr4:25878625-25878116 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 12-535 |
| Cow position: | chr4:61710037-61710529 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 20-536 |
| Cow position: | chr4:46492128-46491615 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 86 |
| Conread position: | 24-537 |
| Cow position: | chr4:45197336-45196817 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 354 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 25-508 |
| Cow position: | chr4:9105623-9105142 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 28-512 |
| Cow position: | chr4:24134521-24134999 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 28-536 |
| Cow position: | chr4:61952670-61952155 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 32-536 |
| Cow position: | chr4:7214599-7215112 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 34-447 |
| Cow position: | chr4:5575356-5574937 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 38-536 |
| Cow position: | chr4:38909671-38909174 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 176 |
| Conread position: | 42-510 |
| Cow position: | chr4:59355733-59356206 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 12 |
| Conread position: | 44-450 |
| Cow position: | chr4:58483907-58483499 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 65-374 |
| Cow position: | chr4:68575917-68576225 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 75-535 |
| Cow position: | chr4:19206830-19206362 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 405 |
| Conread position: | 90-309 |
| Cow position: | chr4:61625448-61625669 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 138-461 |
| Cow position: | chr4:47929243-47928912 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 68 |
| Conread position: | 140-380 |
| Cow position: | chr4:29074418-29074655 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 91, 74 |
Show alignments to all cow chromosomes.