Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               2-196
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               2-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               23, 206
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 165
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               2-490
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               2-532
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 355
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 486
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 114
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 186
               

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               3-318
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               3-421
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 168
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 150
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 153
               

               Conread position:
               4-350
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               4-485
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               4-509
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               12-535
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               20-536
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 86
               

               Conread position:
               24-537
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               354
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               25-508
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               28-512
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               28-536
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               32-536
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 107
               

               Conread position:
               34-447
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               38-536
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 176
               

               Conread position:
               42-510
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               44-450
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               174, 75
               

               Conread position:
               65-374
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               75-535
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 405
               

               Conread position:
               90-309
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               138-461
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 68
               

               Conread position:
               140-380
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               91, 74
               
Show alignments to all cow chromosomes.