Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               2-181
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               2-187
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 126
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 104
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 102
               

               Conread position:
               2-335
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               2-496
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               329
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 134
               

               Conread position:
               2-502
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 314
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 152
               

               Conread position:
               3-512
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 192
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               350
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               4-530
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 111
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               5-537
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               12-321
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               12-499
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               12-536
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               13-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               20-466
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               24-212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               25-232
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 179
               

               Conread position:
               25-450
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 93
               

               Conread position:
               27-374
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 26
               

               Conread position:
               57-300
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               59-260
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               61-534
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               62-536
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               73-536
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               82-536
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               112-499
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 26
               

               Conread position:
               132-520
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 54
               
Show alignments to all cow chromosomes.