Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 494
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               2-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               248, 180
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               2-368
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 126
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 306
               

               Conread position:
               2-427
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               2-440
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               2-505
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               2-509
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 19
               

               Conread position:
               2-516
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               2-527
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               354
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 485
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 464
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               3-535
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               4-189
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               4-196
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               9-194
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               10-516
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               12-533
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               337
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               20-293
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               24-532
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 284
               

               Conread position:
               24-536
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 100
               

               Conread position:
               25-537
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               31-372
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               116, 124
               

               Conread position:
               31-510
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               324
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               187, 69
               

               Conread position:
               32-260
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               33-199
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 95
               

               Conread position:
               34-309
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               36-536
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 454
               

               Conread position:
               57-345
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               62-537
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 145
               

               Conread position:
               75-518
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               88-519
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 139
               

               Conread position:
               94-320
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.