Cow genome map
Conread name: | rfat0139_b21.y1 |
Conread position: | 1-185 |
Cow position: | chr7:44544784-44544962 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 22, 84 |
Conread position: | 1-380 |
Cow position: | chr7:58644037-58643654 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 33 |
Conread position: | 1-514 |
Cow position: | chr7:48024889-48024383 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 349 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 14 |
Conread position: | 1-530 |
Cow position: | chr7:63135369-63134847 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 343 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 2-181 |
Cow position: | chr7:48762628-48762809 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 2-254 |
Cow position: | chr7:66319087-66318832 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 141 |
Conread position: | 2-277 |
Cow position: | chr7:13821827-13821548 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 201 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 19, 42 |
Conread position: | 2-279 |
Cow position: | chr7:52448626-52448907 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 203 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 19, 82 |
Conread position: | 2-319 |
Cow position: | chr7:37190205-37189881 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 210 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 23, 207 |
Conread position: | 2-323 |
Cow position: | chr7:40203533-40203205 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 216 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 16, 207 |
Conread position: | 2-410 |
Cow position: | chr7:33962844-33963264 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 131 |
Conread position: | 2-530 |
Cow position: | chr7:38145342-38145869 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 123 |
Conread position: | 2-534 |
Cow position: | chr7:60741403-60741942 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 484 |
Conread position: | 2-534 |
Cow position: | chr7:60757676-60758197 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 2-535 |
Cow position: | chr7:56822183-56822712 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 458 |
Conread position: | 2-536 |
Cow position: | chr7:36472491-36471966 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 57 |
Conread position: | 2-536 |
Cow position: | chr7:52801071-52801607 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 297 |
Conread position: | 3-308 |
Cow position: | chr7:22632978-22633290 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 208 |
Conread position: | 3-345 |
Cow position: | chr7:5436487-5436826 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 240 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 18, 158 |
Conread position: | 3-373 |
Cow position: | chr7:20225752-20226118 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 20 |
Conread position: | 3-380 |
Cow position: | chr7:22879565-22879187 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 261 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 131, 18 |
Conread position: | 3-380 |
Cow position: | chr7:31638066-31637682 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 244 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 18, 91 |
Conread position: | 3-383 |
Cow position: | chr7:69132797-69132423 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 266 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 131, 18 |
Conread position: | 3-495 |
Cow position: | chr7:36096576-36096090 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 397 |
Conread position: | 3-523 |
Cow position: | chr7:39419598-39420106 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 193 |
Conread position: | 3-526 |
Cow position: | chr7:61772340-61772892 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 202 |
Conread position: | 4-537 |
Cow position: | chr7:48814655-48814113 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 248 |
Conread position: | 5-317 |
Cow position: | chr7:68263815-68263504 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 154 |
Conread position: | 5-322 |
Cow position: | chr7:49070097-49070424 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 222 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 16, 151 |
Conread position: | 5-532 |
Cow position: | chr7:3949943-3949423 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 78 |
Conread position: | 5-536 |
Cow position: | chr7:26465290-26464793 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 130 |
Conread position: | 5-536 |
Cow position: | chr7:34082965-34082427 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 280 |
Conread position: | 6-390 |
Cow position: | chr7:17223726-17224113 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 254 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 7-354 |
Cow position: | chr7:65387286-65387653 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 253 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 139, 315 |
Conread position: | 7-389 |
Cow position: | chr7:54482744-54483125 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 254 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 14, 47 |
Conread position: | 13-477 |
Cow position: | chr7:10450737-10451205 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 47 |
Conread position: | 21-327 |
Cow position: | chr7:36128284-36127973 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 113, 199 |
Conread position: | 24-532 |
Cow position: | chr7:20829532-20829023 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 7 |
Conread position: | 27-467 |
Cow position: | chr7:63548415-63548856 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 168 |
Conread position: | 28-167 |
Cow position: | chr7:34218961-34219099 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 31-536 |
Cow position: | chr7:51406959-51406453 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 108 |
Conread position: | 36-506 |
Cow position: | chr7:99073-99550 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 105 |
Conread position: | 41-381 |
Cow position: | chr7:42814330-42813989 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 12 |
Conread position: | 43-514 |
Cow position: | chr7:32437817-32438284 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 319 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 29, 222 |
Conread position: | 44-519 |
Cow position: | chr7:10036380-10035913 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 44 |
Conread position: | 52-485 |
Cow position: | chr7:58547835-58548266 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 169 |
Conread position: | 59-536 |
Cow position: | chr7:14865732-14865268 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 78 |
Conread position: | 79-380 |
Cow position: | chr7:19605110-19605413 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 212 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 98, 59 |
Conread position: | 80-537 |
Cow position: | chr7:61424070-61424540 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 138 |
Conread position: | 81-438 |
Cow position: | chr7:2578160-2577794 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 121 |
Conread position: | 89-534 |
Cow position: | chr7:998641-998189 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 132 |
Conread position: | 93-492 |
Cow position: | chr7:33063398-33063791 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 72 |
Conread position: | 96-536 |
Cow position: | chr7:7284380-7283960 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 292 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 94, 30 |
Conread position: | 96-536 |
Cow position: | chr7:59141656-59141213 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 218 |
Conread position: | 97-534 |
Cow position: | chr7:53404831-53404393 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 160 |
Conread position: | 139-510 |
Cow position: | chr7:49403159-49403532 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 82 |
Conread position: | 187-536 |
Cow position: | chr7:22341924-22342275 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 118 |
Show alignments to all cow chromosomes.