Cow genome map
| Conread name: | rfat0139_b21.y1 |
| Conread position: | 1-181 |
| Cow position: | chr8:28150690-28150871 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 1-191 |
| Cow position: | chr8:32000824-32001015 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-220 |
| Cow position: | chr8:51504660-51504885 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 117 |
| Conread position: | 1-433 |
| Cow position: | chr8:46214771-46215195 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 1-483 |
| Cow position: | chr8:4998676-4998213 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 1-516 |
| Cow position: | chr8:55343282-55342801 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 20 |
| Conread position: | 1-536 |
| Cow position: | chr8:8279000-8279551 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 176 |
| Conread position: | 1-536 |
| Cow position: | chr8:12661456-12661994 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 2-186 |
| Cow position: | chr8:741768-741951 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 2-296 |
| Cow position: | chr8:21116097-21116395 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 2-304 |
| Cow position: | chr8:21948533-21948846 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-309 |
| Cow position: | chr8:36921116-36920799 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 2-330 |
| Cow position: | chr8:24889539-24889215 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 2-357 |
| Cow position: | chr8:9237465-9237818 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 2-380 |
| Cow position: | chr8:8531841-8532221 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 2-434 |
| Cow position: | chr8:37534741-37534289 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-455 |
| Cow position: | chr8:26195948-26196412 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 233 |
| Conread position: | 2-469 |
| Cow position: | chr8:26338972-26338511 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 2-491 |
| Cow position: | chr8:25677809-25678317 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 377 |
| Conread position: | 2-512 |
| Cow position: | chr8:5243721-5244238 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 2-532 |
| Cow position: | chr8:27535163-27535680 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 172 |
| Conread position: | 2-534 |
| Cow position: | chr8:41659090-41659630 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 2-535 |
| Cow position: | chr8:13558987-13558440 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 2-536 |
| Cow position: | chr8:9995172-9994640 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 2-536 |
| Cow position: | chr8:11226529-11227068 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 2-536 |
| Cow position: | chr8:53004170-53004713 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 2-537 |
| Cow position: | chr8:27561445-27561974 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 3-530 |
| Cow position: | chr8:8224649-8225170 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 254 |
| Conread position: | 3-536 |
| Cow position: | chr8:42540638-42541169 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 4-536 |
| Cow position: | chr8:18290339-18290851 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 10-320 |
| Cow position: | chr8:44856230-44855915 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 212 |
| Conread position: | 10-536 |
| Cow position: | chr8:47359047-47359564 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 375 |
| Conread position: | 12-534 |
| Cow position: | chr8:12057282-12056736 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 20-438 |
| Cow position: | chr8:27368064-27367645 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 20-439 |
| Cow position: | chr8:8391757-8392180 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 107 |
| Conread position: | 25-513 |
| Cow position: | chr8:36309337-36309816 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 28-315 |
| Cow position: | chr8:46629329-46629597 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 29-212 |
| Cow position: | chr8:25497994-25497810 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 29-532 |
| Cow position: | chr8:48791034-48790547 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 231 |
| Conread position: | 39-450 |
| Cow position: | chr8:22415731-22415298 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 55-529 |
| Cow position: | chr8:8319507-8319035 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 52 |
| Conread position: | 63-536 |
| Cow position: | chr8:45165492-45165963 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 146 |
| Conread position: | 82-536 |
| Cow position: | chr8:1385229-1384758 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 97-516 |
| Cow position: | chr8:21728380-21727964 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 139-531 |
| Cow position: | chr8:34111311-34110912 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 346 |
| Conread position: | 141-506 |
| Cow position: | chr8:47655218-47655594 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 72, 271 |
| Conread position: | 158-535 |
| Cow position: | chr8:19823010-19823390 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 169-536 |
| Cow position: | chr8:21234568-21234187 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
Show alignments to all cow chromosomes.