Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 117
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               1-483
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               1-516
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               2-186
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               2-304
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               23, 134
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               2-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               2-380
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               2-434
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-455
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 233
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 137
               

               Conread position:
               2-491
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 377
               

               Conread position:
               2-512
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               2-532
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 172
               

               Conread position:
               2-534
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               3-530
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 254
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               10-320
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 212
               

               Conread position:
               10-536
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 375
               

               Conread position:
               12-534
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               20-438
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               114, 38
               

               Conread position:
               20-439
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 107
               

               Conread position:
               25-513
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 87
               

               Conread position:
               28-315
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               29-212
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               29-532
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 231
               

               Conread position:
               39-450
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               55-529
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 52
               

               Conread position:
               63-536
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 146
               

               Conread position:
               82-536
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 103
               

               Conread position:
               97-516
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               139-531
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 346
               

               Conread position:
               141-506
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               72, 271
               

               Conread position:
               158-535
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               169-536
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 143
               
Show alignments to all cow chromosomes.