Cow genome map
Conread name: | rfat0139_b21.y1 |
Conread position: | 1-183 |
Cow position: | chr9:10760541-10760360 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 1-303 |
Cow position: | chr9:27450479-27450784 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 216 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 20, 184 |
Conread position: | 1-505 |
Cow position: | chr9:5608396-5608909 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 93 |
Conread position: | 2-309 |
Cow position: | chr9:11744316-11744625 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 212 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 20, 51 |
Conread position: | 2-345 |
Cow position: | chr9:3932738-3933086 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 100 |
Conread position: | 2-365 |
Cow position: | chr9:19079240-19078870 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 157 |
Conread position: | 2-442 |
Cow position: | chr9:44579845-44580298 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 2-512 |
Cow position: | chr9:40223-40732 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 23 |
Conread position: | 3-212 |
Cow position: | chr9:7019824-7019615 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 18, 54 |
Conread position: | 3-534 |
Cow position: | chr9:9578176-9577642 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 102 |
Conread position: | 3-535 |
Cow position: | chr9:6979573-6979036 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 39 |
Conread position: | 3-536 |
Cow position: | chr9:9558753-9559267 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 3-537 |
Cow position: | chr9:59431869-59431339 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 18 |
Conread position: | 4-222 |
Cow position: | chr9:9889502-9889286 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 153 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 129, 37 |
Conread position: | 4-380 |
Cow position: | chr9:28702823-28702440 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 176 |
Conread position: | 4-536 |
Cow position: | chr9:56166049-56166582 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 4-537 |
Cow position: | chr9:10111354-10110834 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 18 |
Conread position: | 5-274 |
Cow position: | chr9:51160215-51159942 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 16, 212 |
Conread position: | 20-259 |
Cow position: | chr9:44821241-44821002 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 157 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 114, 158 |
Conread position: | 24-209 |
Cow position: | chr9:9368191-9368008 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 24-521 |
Cow position: | chr9:64025475-64025980 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 35 |
Conread position: | 25-536 |
Cow position: | chr9:35746542-35747052 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 110 |
Conread position: | 31-537 |
Cow position: | chr9:31062039-31061549 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 341 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 102, 270 |
Conread position: | 32-535 |
Cow position: | chr9:11713284-11712763 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 41 |
Conread position: | 33-184 |
Cow position: | chr9:2859377-2859529 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 75 |
Conread position: | 34-360 |
Cow position: | chr9:8738306-8738618 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 232 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 75, 33 |
Conread position: | 50-506 |
Cow position: | chr9:15987332-15986871 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 107 |
Conread position: | 52-534 |
Cow position: | chr9:36585306-36584831 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 72 |
Conread position: | 60-359 |
Cow position: | chr9:22940852-22940549 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 232 |
Conread position: | 65-533 |
Cow position: | chr9:39728298-39728782 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 30 |
Conread position: | 78-250 |
Cow position: | chr9:30485924-30485745 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 67, 151 |
Conread position: | 93-447 |
Cow position: | chr9:42216636-42216278 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 247 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 115, 124 |
Conread position: | 106-537 |
Cow position: | chr9:47110530-47110104 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 301 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 141-376 |
Cow position: | chr9:9996875-9997114 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 187-536 |
Cow position: | chr9:49457514-49457156 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 90 |
Show alignments to all cow chromosomes.