Cow genome map

Conread name: rfat0139_b21.y1

Conread position: 1-183
Cow position: chr9:10760541-10760360 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 32

Conread position: 1-303
Cow position: chr9:27450479-27450784 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 184

Conread position: 1-505
Cow position: chr9:5608396-5608909 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 2-309
Cow position: chr9:11744316-11744625 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 51

Conread position: 2-345
Cow position: chr9:3932738-3933086 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 100

Conread position: 2-365
Cow position: chr9:19079240-19078870 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 157

Conread position: 2-442
Cow position: chr9:44579845-44580298 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 2-512
Cow position: chr9:40223-40732 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 3-212
Cow position: chr9:7019824-7019615 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 54

Conread position: 3-534
Cow position: chr9:9578176-9577642 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 3-535
Cow position: chr9:6979573-6979036 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 3-536
Cow position: chr9:9558753-9559267 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 3-537
Cow position: chr9:59431869-59431339 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 18

Conread position: 4-222
Cow position: chr9:9889502-9889286 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 37

Conread position: 4-380
Cow position: chr9:28702823-28702440 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 176

Conread position: 4-536
Cow position: chr9:56166049-56166582 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 4-537
Cow position: chr9:10111354-10110834 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 18

Conread position: 5-274
Cow position: chr9:51160215-51159942 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 212

Conread position: 20-259
Cow position: chr9:44821241-44821002 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 158

Conread position: 24-209
Cow position: chr9:9368191-9368008 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 24-521
Cow position: chr9:64025475-64025980 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 35

Conread position: 25-536
Cow position: chr9:35746542-35747052 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 110

Conread position: 31-537
Cow position: chr9:31062039-31061549 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 341
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 270

Conread position: 32-535
Cow position: chr9:11713284-11712763 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 41

Conread position: 33-184
Cow position: chr9:2859377-2859529 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 75

Conread position: 34-360
Cow position: chr9:8738306-8738618 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 75, 33

Conread position: 50-506
Cow position: chr9:15987332-15986871 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 107

Conread position: 52-534
Cow position: chr9:36585306-36584831 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 72

Conread position: 60-359
Cow position: chr9:22940852-22940549 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 232

Conread position: 65-533
Cow position: chr9:39728298-39728782 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 30

Conread position: 78-250
Cow position: chr9:30485924-30485745 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 151

Conread position: 93-447
Cow position: chr9:42216636-42216278 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 115, 124

Conread position: 106-537
Cow position: chr9:47110530-47110104 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 34

Conread position: 141-376
Cow position: chr9:9996875-9997114 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 187-536
Cow position: chr9:49457514-49457156 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 90

Show alignments to all cow chromosomes.