Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 184
               

               Conread position:
               1-505
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               2-309
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               2-365
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               2-512
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               3-535
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               3-537
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 18
               

               Conread position:
               4-222
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               4-380
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               4-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               4-537
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 18
               

               Conread position:
               5-274
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               16, 212
               

               Conread position:
               20-259
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 158
               

               Conread position:
               24-209
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               24-521
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               25-536
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 110
               

               Conread position:
               31-537
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               102, 270
               

               Conread position:
               32-535
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 41
               

               Conread position:
               33-184
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               34-360
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               50-506
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 107
               

               Conread position:
               52-534
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               60-359
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 232
               

               Conread position:
               65-533
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               78-250
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 151
               

               Conread position:
               93-447
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               115, 124
               

               Conread position:
               106-537
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               301
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               141-376
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               187-536
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 90
               
Show alignments to all cow chromosomes.