Cow genome map


           Conread name:
           rfat0139_b21.y1
        

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 177
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 200
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 264
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               1-518
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               1-537
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               2-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               2-306
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               19, 307
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               2-523
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               2-531
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 304
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 185
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               2-537
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 323
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               3-380
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-537
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-487
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               5-199
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               6-352
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               6-374
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               10-324
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               10-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               20-536
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               21-260
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               124, 143
               

               Conread position:
               24-536
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 176
               

               Conread position:
               25-196
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               25-536
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 427
               

               Conread position:
               25-536
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 96
               

               Conread position:
               37-532
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               46-422
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 42
               

               Conread position:
               55-352
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               72-536
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 87
               

               Conread position:
               141-366
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               161-531
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               163-536
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 58
               

               Conread position:
               187-531
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               249-525
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               98, 233
               
Show alignments to all cow chromosomes.