Cow genome map
| Conread name: | rfbs3907b_e1.y1 |
| Conread position: | 1-314 |
| Cow position: | chr17:22499417-22499104 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 242, 250 |
| Conread position: | 2-321 |
| Cow position: | chr17:22590291-22589972 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 3-313 |
| Cow position: | chr17:22589702-22589392 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 3-315 |
| Cow position: | chr17:22552284-22551972 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 3-315 |
| Cow position: | chr17:41440639-41440327 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 3-316 |
| Cow position: | chr17:22452149-22451836 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 242, 237 |
| Conread position: | 3-316 |
| Cow position: | chr17:22452233-22451920 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 3-316 |
| Cow position: | chr17:22473566-22473879 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 254, 231 |
| Conread position: | 3-317 |
| Cow position: | chr17:41441059-41440745 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 242, 234 |
| Conread position: | 4-290 |
| Cow position: | chr17:22498826-22498540 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 4-293 |
| Cow position: | chr17:22551779-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 246, 238 |
| Conread position: | 4-308 |
| Cow position: | chr17:22452400-22452096 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 4-311 |
| Cow position: | chr17:22451980-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 247, 238 |
| Conread position: | 4-314 |
| Cow position: | chr17:22498994-22498684 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 4-314 |
| Cow position: | chr17:22499246-22498936 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 164, 170 |
| Conread position: | 4-314 |
| Cow position: | chr17:22499330-22499020 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 234, 247 |
| Conread position: | 4-314 |
| Cow position: | chr17:22552367-22552057 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 4-314 |
| Cow position: | chr17:22552703-22552393 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 4-314 |
| Cow position: | chr17:22553039-22552729 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 4-314 |
| Cow position: | chr17:22589953-22589643 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 240, 248 |
| Conread position: | 4-314 |
| Cow position: | chr17:22590121-22589811 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 4-315 |
| Cow position: | chr17:22499162-22498851 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 4-315 |
| Cow position: | chr17:22551863-22551552 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 4-315 |
| Cow position: | chr17:22552199-22551888 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-316 |
| Cow position: | chr17:22452064-22451752 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 4-316 |
| Cow position: | chr17:22452316-22452004 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 4-316 |
| Cow position: | chr17:22473483-22473795 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 246, 230 |
| Conread position: | 4-316 |
| Cow position: | chr17:22552535-22552223 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 4-317 |
| Cow position: | chr17:22590037-22589724 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 4-321 |
| Cow position: | chr17:22498910-22498593 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-325 |
| Cow position: | chr17:22499078-22498757 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 249, 229 |
| Conread position: | 4-344 |
| Cow position: | chr17:22552955-22552615 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 4-346 |
| Cow position: | chr17:22551947-22551605 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 4-346 |
| Cow position: | chr17:22552115-22551773 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-346 |
| Cow position: | chr17:22552619-22552277 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 4-346 |
| Cow position: | chr17:22552787-22552445 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 4-346 |
| Cow position: | chr17:22590205-22589863 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 5-315 |
| Cow position: | chr17:22553122-22552812 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 8-314 |
| Cow position: | chr17:22473655-22473962 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 242, 231 |
| Conread position: | 10-314 |
| Cow position: | chr17:22589779-22589475 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 235, 224 |
| Conread position: | 16-322 |
| Cow position: | chr17:22473411-22473716 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 241, 218 |
| Conread position: | 16-324 |
| Cow position: | chr17:22589521-22589213 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 28-316 |
| Cow position: | chr17:41441118-41440830 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 217, 211 |
| Conread position: | 35-314 |
| Cow position: | chr17:22473262-22473541 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 88-316 |
| Cow position: | chr17:22452400-22452172 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 155, 163 |
Show alignments to all cow chromosomes.