Cow genome map
| Conread name: | rfbs3907b_e1.y1 |
| Conread position: | 1-275 |
| Cow position: | chr19:23650205-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-283 |
| Cow position: | chr19:14959101-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 1-284 |
| Cow position: | chr19:23597428-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 226, 246 |
| Conread position: | 1-314 |
| Cow position: | chr19:14940219-14940532 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 153 |
| Conread position: | 1-314 |
| Cow position: | chr19:43570077-43569764 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-315 |
| Cow position: | chr19:43570161-43569847 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-316 |
| Cow position: | chr19:23649785-23650100 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 239, 249 |
| Conread position: | 1-316 |
| Cow position: | chr19:23649953-23650268 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 1-316 |
| Cow position: | chr19:23650121-23650436 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 1-316 |
| Cow position: | chr19:43570245-43569930 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 246, 233 |
| Conread position: | 1-321 |
| Cow position: | chr19:14940387-14940707 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 142, 154 |
| Conread position: | 1-323 |
| Cow position: | chr19:23613411-23613732 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 1-335 |
| Cow position: | chr19:14948320-14947986 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 172, 159 |
| Conread position: | 1-344 |
| Cow position: | chr19:23597176-23597519 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 238 |
| Conread position: | 1-346 |
| Cow position: | chr19:14940051-14940396 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 81 |
| Conread position: | 1-346 |
| Cow position: | chr19:14959672-14959329 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 2-316 |
| Cow position: | chr19:20677511-20677825 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 253, 232 |
| Conread position: | 3-281 |
| Cow position: | chr19:14959588-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 70, 84 |
| Conread position: | 3-310 |
| Cow position: | chr19:23614589-23614896 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 142, 157 |
| Conread position: | 3-314 |
| Cow position: | chr19:14940557-14940868 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 77 |
| Conread position: | 3-316 |
| Cow position: | chr19:23614001-23614314 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 247, 234 |
| Conread position: | 3-318 |
| Cow position: | chr19:14940137-14940452 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 3-318 |
| Cow position: | chr19:23613581-23613896 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 3-321 |
| Cow position: | chr19:14960076-14959761 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 141, 134 |
| Conread position: | 4-202 |
| Cow position: | chr19:23597515-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 4-270 |
| Cow position: | chr19:14940810-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 4-314 |
| Cow position: | chr19:14940306-14940616 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-314 |
| Cow position: | chr19:14959503-14959202 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 4-314 |
| Cow position: | chr19:20635483-20635173 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 246, 230 |
| Conread position: | 4-314 |
| Cow position: | chr19:23613834-23614144 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 241, 233 |
| Conread position: | 4-314 |
| Cow position: | chr19:23614086-23614396 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 73, 78 |
| Conread position: | 4-314 |
| Cow position: | chr19:23614422-23614732 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 241, 230 |
| Conread position: | 4-314 |
| Cow position: | chr19:23614758-23615068 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 4-315 |
| Cow position: | chr19:23649620-23649931 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 239, 246 |
| Conread position: | 4-316 |
| Cow position: | chr19:14948401-14948089 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 249, 234 |
| Conread position: | 4-316 |
| Cow position: | chr19:23596930-23597239 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 4-316 |
| Cow position: | chr19:23597263-23597575 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 140, 132 |
| Conread position: | 4-316 |
| Cow position: | chr19:23614170-23614482 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 4-316 |
| Cow position: | chr19:23614254-23614566 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 4-316 |
| Cow position: | chr19:23614338-23614650 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 246, 230 |
| Conread position: | 4-316 |
| Cow position: | chr19:23614506-23614818 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 4-316 |
| Cow position: | chr19:23614674-23614986 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 249, 232 |
| Conread position: | 4-316 |
| Cow position: | chr19:23649452-23649764 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 4-316 |
| Cow position: | chr19:23649536-23649848 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 4-316 |
| Cow position: | chr19:23649704-23650016 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 160, 140 |
| Conread position: | 4-319 |
| Cow position: | chr19:14960241-14959929 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 4-320 |
| Cow position: | chr19:23597347-23597663 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-344 |
| Cow position: | chr19:23597095-23597435 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 234 |
| Conread position: | 4-344 |
| Cow position: | chr19:23649872-23650212 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 236, 246 |
| Conread position: | 4-346 |
| Cow position: | chr19:14959176-14958840 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 253, 58 |
| Conread position: | 4-346 |
| Cow position: | chr19:14960409-14960069 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 241, 235 |
| Conread position: | 4-346 |
| Cow position: | chr19:23613750-23614092 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 246, 230 |
| Conread position: | 7-315 |
| Cow position: | chr19:14959257-14958955 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 74 |
| Conread position: | 8-316 |
| Cow position: | chr19:14940730-14941038 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 145 |
| Conread position: | 9-281 |
| Cow position: | chr19:14960154-14959882 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 9-316 |
| Cow position: | chr19:20678022-20678329 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 9-317 |
| Cow position: | chr19:20678442-20678747 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 80 |
| Conread position: | 10-315 |
| Cow position: | chr19:20677771-20678076 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 10-316 |
| Cow position: | chr19:14940648-14940954 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 231, 242 |
| Conread position: | 10-316 |
| Cow position: | chr19:20677855-20678161 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 10-320 |
| Cow position: | chr19:20677687-20677997 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 12-296 |
| Cow position: | chr19:20635308-20635023 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 12-316 |
| Cow position: | chr19:20635560-20635255 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 16-314 |
| Cow position: | chr19:20635639-20635341 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 16-314 |
| Cow position: | chr19:20677441-20677739 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 229, 218 |
| Conread position: | 16-314 |
| Cow position: | chr19:20678197-20678495 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 246, 222 |
| Conread position: | 17-316 |
| Cow position: | chr19:23649297-23649596 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 22-316 |
| Cow position: | chr19:20678287-20678581 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 23-316 |
| Cow position: | chr19:14939987-14940282 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 218 |
| Conread position: | 25-346 |
| Cow position: | chr19:23613351-23613672 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 209, 226 |
| Conread position: | 83-316 |
| Cow position: | chr19:43570247-43570014 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 93-316 |
| Cow position: | chr19:20635646-20635423 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 102-346 |
| Cow position: | chr19:14948470-14948227 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 148, 71 |
Show alignments to all cow chromosomes.