Cow genome map


           Conread name:
           rfbs3907b_e1.y1
        

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               152, 158
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               143, 158
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               144, 162
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               152, 173
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 162
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 175
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 173
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               118, 252
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 250
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               3-315
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               3-315
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               237, 247
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               247, 239
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               165, 170
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 230
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 0
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               70, 98
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 245
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               75, 71
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               4-202
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 247
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 94
               

               Conread position:
               4-309
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               73, 78
               

               Conread position:
               4-313
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               152, 132
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               229, 250
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               217, 247
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               238, 246
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               150, 133
               

               Conread position:
               4-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               4-315
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               73, 80
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 167
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               163, 147
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               246, 234
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               163, 147
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 78
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 78
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 78
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 230
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               68, 80
               

               Conread position:
               4-346
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               5-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               8-316
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-316
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               167, 145
               

               Conread position:
               10-346
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               74, 67
               

               Conread position:
               10-346
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               74, 67
               

               Conread position:
               15-316
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               226, 235
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 143
               

               Conread position:
               16-321
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               157, 142
               

               Conread position:
               17-315
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               28-316
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               30-316
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               220, 212
               

               Conread position:
               33-310
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-315
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-316
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               78-316
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               80-316
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               88-313
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               152, 162
               

               Conread position:
               88-315
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               89-323
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               110-322
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 124
               
Show alignments to all cow chromosomes.