Cow genome map

Conread name: rfbs3907b_e1.y1

Conread position: 1-201
Cow position: chr22:11666760-11666960 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 77

Conread position: 1-274
Cow position: chr22:12399027-12398754 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 158

Conread position: 1-278
Cow position: chr22:12385185-12384908 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 143, 158

Conread position: 1-282
Cow position: chr22:11701414-11701695 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 144, 162

Conread position: 1-284
Cow position: chr22:11641171-11641454 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 152, 173

Conread position: 1-284
Cow position: chr22:11666676-11666959 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 162

Conread position: 1-314
Cow position: chr22:14430715-14431021 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 88

Conread position: 1-316
Cow position: chr22:12385439-12385122 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 175

Conread position: 1-316
Cow position: chr22:12385607-12385290 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 85

Conread position: 1-316
Cow position: chr22:12399447-12399132 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 85

Conread position: 1-316
Cow position: chr22:12458211-12457896 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 159, 169

Conread position: 1-316
Cow position: chr22:12499099-12499414 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 75

Conread position: 1-316
Cow position: chr22:12544894-12545209 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 167, 173

Conread position: 1-317
Cow position: chr22:12385523-12385205 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 252

Conread position: 1-320
Cow position: chr22:11640667-11640986 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 66, 84

Conread position: 1-342
Cow position: chr22:12399363-12399022 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 250

Conread position: 1-346
Cow position: chr22:11640835-11641180 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 86

Conread position: 1-346
Cow position: chr22:11641087-11641432 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-346
Cow position: chr22:11701330-11701675 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-346
Cow position: chr22:12399699-12399354 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 76

Conread position: 1-346
Cow position: chr22:12476160-12475815 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 76

Conread position: 2-316
Cow position: chr22:14430548-14430862 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 81

Conread position: 3-315
Cow position: chr22:12418880-12418568 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 85, 78

Conread position: 3-315
Cow position: chr22:12430921-12430609 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 237, 247

Conread position: 3-316
Cow position: chr22:12418796-12418483 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 74, 79

Conread position: 3-316
Cow position: chr22:12432013-12431700 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 247, 239

Conread position: 3-316
Cow position: chr22:12458377-12458064 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 86

Conread position: 3-316
Cow position: chr22:14429709-14430022 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 165, 170

Conread position: 3-323
Cow position: chr22:11640921-11641240 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 230

Conread position: 3-325
Cow position: chr22:14430213-14430535 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 86, 61

Conread position: 3-332
Cow position: chr22:11701164-11701492 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 0

Conread position: 3-345
Cow position: chr22:12476326-12475984 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 98

Conread position: 3-346
Cow position: chr22:11640753-11641096 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 245

Conread position: 3-346
Cow position: chr22:11666510-11666853 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 71

Conread position: 3-346
Cow position: chr22:12399109-12398766 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 83

Conread position: 4-202
Cow position: chr22:12475485-12475287 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 73

Conread position: 4-205
Cow position: chr22:11641258-11641459 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 78

Conread position: 4-283
Cow position: chr22:12475569-12475290 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 78

Conread position: 4-283
Cow position: chr22:12499690-12499969 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 78

Conread position: 4-305
Cow position: chr22:12399780-12399479 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 247

Conread position: 4-305
Cow position: chr22:12498934-12499235 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 94

Conread position: 4-309
Cow position: chr22:12458460-12458155 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 78

Conread position: 4-310
Cow position: chr22:12431256-12430950 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 85

Conread position: 4-310
Cow position: chr22:12432432-12432126 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 78

Conread position: 4-313
Cow position: chr22:12458124-12457815 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 60

Conread position: 4-314
Cow position: chr22:12385688-12385376 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 152, 132

Conread position: 4-314
Cow position: chr22:12399276-12398966 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 85

Conread position: 4-314
Cow position: chr22:12399612-12399302 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 229, 250

Conread position: 4-314
Cow position: chr22:12431172-12430862 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 217, 247

Conread position: 4-314
Cow position: chr22:12431844-12431534 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 80

Conread position: 4-314
Cow position: chr22:12432264-12431954 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 238, 246

Conread position: 4-314
Cow position: chr22:12458544-12458234 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 4-314
Cow position: chr22:12475737-12475427 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 75

Conread position: 4-314
Cow position: chr22:12499522-12499832 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 73, 85

Conread position: 4-314
Cow position: chr22:12499606-12499916 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 133

Conread position: 4-314
Cow position: chr22:46654329-46654639 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 78

Conread position: 4-315
Cow position: chr22:12475989-12475678 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 78

Conread position: 4-316
Cow position: chr22:12385266-12384954 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 80

Conread position: 4-316
Cow position: chr22:12431424-12431112 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 73, 79

Conread position: 4-316
Cow position: chr22:12431592-12431280 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 78

Conread position: 4-316
Cow position: chr22:12431676-12431364 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 85

Conread position: 4-316
Cow position: chr22:12431928-12431616 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 79

Conread position: 4-316
Cow position: chr22:12432180-12431868 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 148, 167

Conread position: 4-316
Cow position: chr22:12475653-12475341 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 142, 133

Conread position: 4-316
Cow position: chr22:12475821-12475509 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 147

Conread position: 4-316
Cow position: chr22:12476409-12476097 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 246, 234

Conread position: 4-316
Cow position: chr22:12499270-12499582 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 78

Conread position: 4-316
Cow position: chr22:12499438-12499750 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 163, 147

Conread position: 4-316
Cow position: chr22:14429878-14430190 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 4-317
Cow position: chr22:12475905-12475592 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 4-317
Cow position: chr22:12476073-12475760 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 4-317
Cow position: chr22:12499186-12499499 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 51

Conread position: 4-317
Cow position: chr22:12499354-12499667 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 78

Conread position: 4-317
Cow position: chr22:46654161-46654474 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 202
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 78

Conread position: 4-320
Cow position: chr22:12418963-12418647 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 78

Conread position: 4-320
Cow position: chr22:14430298-14430614 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 60

Conread position: 4-345
Cow position: chr22:11641006-11641347 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 230

Conread position: 4-346
Cow position: chr22:11666595-11666937 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-346
Cow position: chr22:12431088-12430746 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 78

Conread position: 4-346
Cow position: chr22:12432096-12431754 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 68, 80

Conread position: 4-346
Cow position: chr22:12458292-12457950 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-238
Cow position: chr22:12419315-12419082 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 74

Conread position: 5-314
Cow position: chr22:12458627-12458318 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 84

Conread position: 5-316
Cow position: chr22:46654498-46654809 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 84

Conread position: 8-316
Cow position: chr22:12431504-12431196 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 9-316
Cow position: chr22:14468044-14468351 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 145

Conread position: 10-346
Cow position: chr22:12476235-12475899 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 74, 67

Conread position: 10-346
Cow position: chr22:12499024-12499360 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 74, 67

Conread position: 15-316
Cow position: chr22:12432337-12432036 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 226, 235

Conread position: 16-319
Cow position: chr22:14468217-14468522 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 143

Conread position: 16-321
Cow position: chr22:14430478-14430783 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 142

Conread position: 17-315
Cow position: chr22:12385337-12385039 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 60, 69

Conread position: 28-316
Cow position: chr22:12419023-12418735 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 56

Conread position: 30-316
Cow position: chr22:12399838-12399552 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 220, 212

Conread position: 33-310
Cow position: chr22:11666456-11666733 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 33-315
Cow position: chr22:11701110-11701392 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 34-316
Cow position: chr22:11640616-11640898 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 22

Conread position: 78-316
Cow position: chr22:12419326-12419088 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 77

Conread position: 80-316
Cow position: chr22:12545621-12545854 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 151, 9

Conread position: 88-313
Cow position: chr22:12498850-12499075 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 152, 162

Conread position: 88-315
Cow position: chr22:12432432-12432205 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 68

Conread position: 89-323
Cow position: chr22:12458627-12458394 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 228, 0

Conread position: 110-322
Cow position: chr22:14467977-14468189 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 124

Show alignments to all cow chromosomes.