Cow genome map
| Conread name: | rfbs3907b_e1.y1 |
| Conread position: | 1-280 |
| Cow position: | chr28:9299281-9299560 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 1-284 |
| Cow position: | chr28:33210372-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 1-315 |
| Cow position: | chr28:7757896-7758210 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 1-315 |
| Cow position: | chr28:9253079-9253393 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 1-316 |
| Cow position: | chr28:33210288-33210604 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 3-303 |
| Cow position: | chr28:11333823-11333523 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 3-309 |
| Cow position: | chr28:7758470-7758776 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 3-309 |
| Cow position: | chr28:9298879-9299183 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 3-315 |
| Cow position: | chr28:7757982-7758294 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 86 |
| Conread position: | 3-346 |
| Cow position: | chr28:9290150-9290487 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-198 |
| Cow position: | chr28:9253418-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 74 |
| Conread position: | 4-273 |
| Cow position: | chr28:11333738-11333469 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 139, 154 |
| Conread position: | 4-281 |
| Cow position: | chr28:9253334-9253611 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-294 |
| Cow position: | chr28:34673502-34673792 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 4-297 |
| Cow position: | chr28:7810252-7810536 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-309 |
| Cow position: | chr28:11333990-11333685 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 254, 237 |
| Conread position: | 4-314 |
| Cow position: | chr28:7757731-7758041 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 4-314 |
| Cow position: | chr28:7758387-7758697 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 241, 233 |
| Conread position: | 4-314 |
| Cow position: | chr28:9299368-9299675 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 4-314 |
| Cow position: | chr28:11333906-11333596 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 4-315 |
| Cow position: | chr28:7757479-7757790 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 4-315 |
| Cow position: | chr28:7757647-7757958 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 4-315 |
| Cow position: | chr28:7810327-7810629 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 74 |
| Conread position: | 4-315 |
| Cow position: | chr28:7810411-7810713 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-315 |
| Cow position: | chr28:9252913-9253225 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 4-315 |
| Cow position: | chr28:9253166-9253477 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 4-316 |
| Cow position: | chr28:7757815-7758127 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 4-316 |
| Cow position: | chr28:9290315-9290625 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 246, 61 |
| Conread position: | 4-316 |
| Cow position: | chr28:9298631-9298940 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 4-316 |
| Cow position: | chr28:34695891-34696203 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 73 |
| Conread position: | 4-316 |
| Cow position: | chr28:34696227-34696539 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 97, 81 |
| Conread position: | 4-323 |
| Cow position: | chr28:9290067-9290380 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 4-346 |
| Cow position: | chr28:9253250-9253592 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 5-321 |
| Cow position: | chr28:11334073-11333758 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 6-296 |
| Cow position: | chr28:7810656-7810946 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 83 |
| Conread position: | 6-315 |
| Cow position: | chr28:9290400-9290708 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 238, 75 |
| Conread position: | 8-316 |
| Cow position: | chr28:11334154-11333846 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 16-238 |
| Cow position: | chr28:34696323-34696545 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 16-315 |
| Cow position: | chr28:9253010-9253309 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 22-314 |
| Cow position: | chr28:9299218-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 25-346 |
| Cow position: | chr28:33210228-33210549 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 27-316 |
| Cow position: | chr28:7757334-7757623 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 32-316 |
| Cow position: | chr28:34673362-34673646 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 40-314 |
| Cow position: | chr28:34695843-34696117 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 106-315 |
| Cow position: | chr28:9299218-9299427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 136, 141 |
Show alignments to all cow chromosomes.