Cow genome map

Conread name: rfbs3907b_e1.y1

Conread position: 1-234
Cow position: chr7:11600707-11600474 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-238
Cow position: chr7:18390558-18390795 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-239
Cow position: chr7:1438477-1438715 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-281
Cow position: chr7:3180597-3180876 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 254, 190

Conread position: 1-314
Cow position: chr7:3180345-3180658 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 90

Conread position: 1-316
Cow position: chr7:1015083-1015398 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 250, 239

Conread position: 1-316
Cow position: chr7:11601127-11600812 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 243, 232

Conread position: 1-316
Cow position: chr7:18390390-18390705 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-319
Cow position: chr7:1014417-1014729 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 243, 0

Conread position: 1-320
Cow position: chr7:1014831-1015150 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 88

Conread position: 2-316
Cow position: chr7:18390223-18390537 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 68

Conread position: 3-315
Cow position: chr7:1439532-1439846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 154, 85

Conread position: 3-315
Cow position: chr7:18390476-18390788 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 74

Conread position: 3-316
Cow position: chr7:11600789-11600476 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 83

Conread position: 3-316
Cow position: chr7:18390308-18390621 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 247, 235

Conread position: 4-232
Cow position: chr7:11434508-11434280 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-240
Cow position: chr7:1440037-1440273 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 4-269
Cow position: chr7:42878541-42878276 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 75

Conread position: 4-308
Cow position: chr7:3179928-3180232 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 137, 152

Conread position: 4-311
Cow position: chr7:1439870-1440176 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 243, 102

Conread position: 4-314
Cow position: chr7:1014918-1015228 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 72

Conread position: 4-314
Cow position: chr7:1015002-1015312 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 80, 75

Conread position: 4-314
Cow position: chr7:1439954-1440263 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 22

Conread position: 4-314
Cow position: chr7:3180012-3180322 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 4-314
Cow position: chr7:8325384-8325694 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 178, 153

Conread position: 4-314
Cow position: chr7:11601040-11600730 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 60

Conread position: 4-314
Cow position: chr7:42878709-42878399 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 81

Conread position: 4-315
Cow position: chr7:3180516-3180825 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 246, 235

Conread position: 4-315
Cow position: chr7:8277743-8278054 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 51

Conread position: 4-315
Cow position: chr7:42878793-42878482 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 85

Conread position: 4-315
Cow position: chr7:42878877-42878566 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 85

Conread position: 4-315
Cow position: chr7:42878961-42878650 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 84

Conread position: 4-315
Cow position: chr7:42879129-42878818 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 238

Conread position: 4-315
Cow position: chr7:42879213-42878902 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 64, 85

Conread position: 4-316
Cow position: chr7:1014750-1015062 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 246, 237

Conread position: 4-316
Cow position: chr7:3180180-3180492 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 253

Conread position: 4-316
Cow position: chr7:8242862-8243174 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 166, 144

Conread position: 4-316
Cow position: chr7:8243617-8243929 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 162, 147

Conread position: 4-316
Cow position: chr7:8277407-8277719 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 102, 80

Conread position: 4-316
Cow position: chr7:8277911-8278223 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 95

Conread position: 4-316
Cow position: chr7:8325048-8325360 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 151, 168

Conread position: 4-316
Cow position: chr7:11434585-11434280 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 194
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 4-316
Cow position: chr7:11434907-11434609 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 240, 60

Conread position: 4-316
Cow position: chr7:42878625-42878313 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 85, 73

Conread position: 4-316
Cow position: chr7:42879045-42878733 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 71

Conread position: 4-317
Cow position: chr7:3180264-3180577 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 263

Conread position: 4-317
Cow position: chr7:8277659-8277972 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 230, 252

Conread position: 4-321
Cow position: chr7:8325804-8326121 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 64

Conread position: 4-338
Cow position: chr7:8325552-8325883 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 230, 252

Conread position: 5-315
Cow position: chr7:42879296-42878986 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 83

Conread position: 6-319
Cow position: chr7:1014668-1014980 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 229, 251

Conread position: 7-315
Cow position: chr7:8277997-8278306 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 83

Conread position: 8-296
Cow position: chr7:11601204-11600916 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 78

Conread position: 8-315
Cow position: chr7:42879377-42879070 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 236, 243

Conread position: 8-317
Cow position: chr7:11600868-11600559 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 242, 226

Conread position: 8-321
Cow position: chr7:8325136-8325449 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 149

Conread position: 9-314
Cow position: chr7:8325725-8326030 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-314
Cow position: chr7:8243791-8244092 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 192
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 54

Conread position: 10-315
Cow position: chr7:18390147-18390452 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 63

Conread position: 10-316
Cow position: chr7:3180438-3180744 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 235, 228

Conread position: 10-316
Cow position: chr7:8243204-8243509 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 75

Conread position: 12-316
Cow position: chr7:8325307-8325612 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 5, 158

Conread position: 16-316
Cow position: chr7:8243545-8243845 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 193
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 131, 155

Conread position: 16-332
Cow position: chr7:8324892-8325208 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 59

Conread position: 25-314
Cow position: chr7:1014273-1014562 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 215, 222

Conread position: 27-316
Cow position: chr7:8324735-8325024 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 47

Conread position: 88-317
Cow position: chr7:3179760-3179989 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 159

Conread position: 90-315
Cow position: chr7:1439451-1439674 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 155, 136

Conread position: 103-317
Cow position: chr7:18390156-18390370 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 55

Conread position: 106-317
Cow position: chr7:11601190-11600979 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 145, 130

Conread position: 106-321
Cow position: chr7:8277257-8277472 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 49

Conread position: 109-316
Cow position: chr7:1014273-1014480 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 142, 129

Conread position: 164-314
Cow position: chr7:18390133-18390283 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 86

Show alignments to all cow chromosomes.