Cow genome map
| Conread name: | rfbs3907b_e1.y1 |
| Conread position: | 1-288 |
| Cow position: | chr8:48407066-48406779 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 172 |
| Conread position: | 1-315 |
| Cow position: | chr8:55581134-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-329 |
| Cow position: | chr8:45200994-45201321 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 1-346 |
| Cow position: | chr8:48406646-48406301 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-346 |
| Cow position: | chr8:48407570-48407225 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 154 |
| Conread position: | 2-316 |
| Cow position: | chr8:55580883-55581197 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 3-314 |
| Cow position: | chr8:46816107-46816418 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 247, 240 |
| Conread position: | 3-314 |
| Cow position: | chr8:46816275-46816586 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 3-316 |
| Cow position: | chr8:46816611-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 3-329 |
| Cow position: | chr8:45200828-45201153 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 3-346 |
| Cow position: | chr8:46817031-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 247, 230 |
| Conread position: | 4-289 |
| Cow position: | chr8:46817116-46817399 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 217, 242 |
| Conread position: | 4-307 |
| Cow position: | chr8:55581053-55581356 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 237, 246 |
| Conread position: | 4-309 |
| Cow position: | chr8:45201669-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 4-310 |
| Cow position: | chr8:6958017-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 228, 239 |
| Conread position: | 4-314 |
| Cow position: | chr8:46816696-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 4-314 |
| Cow position: | chr8:46816864-46817174 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 4-314 |
| Cow position: | chr8:48407399-48407089 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 4-314 |
| Cow position: | chr8:55581305-55581615 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 246, 235 |
| Conread position: | 4-315 |
| Cow position: | chr8:46816360-46816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 4-315 |
| Cow position: | chr8:46816948-46817259 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 158, 168 |
| Conread position: | 4-316 |
| Cow position: | chr8:45201333-45201645 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 4-316 |
| Cow position: | chr8:45201501-45201813 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 4-316 |
| Cow position: | chr8:45201585-45201897 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 4-316 |
| Cow position: | chr8:46816528-46816840 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 238, 253 |
| Conread position: | 4-316 |
| Cow position: | chr8:46816780-46817092 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 4-316 |
| Cow position: | chr8:48407231-48406919 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 4-316 |
| Cow position: | chr8:55581221-55581533 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 4-317 |
| Cow position: | chr8:45201081-45201394 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 4-317 |
| Cow position: | chr8:55581389-55581702 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 4-321 |
| Cow position: | chr8:46816192-46816509 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 246, 234 |
| Conread position: | 4-344 |
| Cow position: | chr8:48406979-48406639 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-346 |
| Cow position: | chr8:48407147-48406805 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 326, 312 |
| Conread position: | 4-346 |
| Cow position: | chr8:48407315-48406973 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 139, 149 |
| Conread position: | 16-316 |
| Cow position: | chr8:46816036-46816336 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 16-316 |
| Cow position: | chr8:55580981-55581281 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 24-346 |
| Cow position: | chr8:48406707-48406385 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 226, 214 |
| Conread position: | 25-296 |
| Cow position: | chr8:48407630-48407359 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 27-317 |
| Cow position: | chr8:45200936-45201226 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 46-346 |
| Cow position: | chr8:6958059-6957760 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 128 |
Show alignments to all cow chromosomes.